RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 RCAN3Q9UKA8 241 aa9.49□□□□□ -0.89
CNOT2-240ENST00000552599 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
CNOT2-240ENST00000552599 ANKLE2Q86XL3 938 aa9.49□□□□□ -0.89
CNOT2-240ENST00000552599 MAP4K4O95819 1239 aaPredicted RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 FAM193AP78312 1265 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 FTSJ3Q8IY81 847 aaKnown RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 NME8Q8N427 588 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 TRIM66O15016 1216 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 DUSP27Q5VZP5 1158 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 SREK1Q8WXA9 508 aaKnown RBP9.48□□□□□ -0.89
CNOT2-240ENST00000552599 PLSCR2Q9NRY7 297 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
CNOT2-240ENST00000552599 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
CNOT2-240ENST00000552599 RRP1P56182 461 aaKnown RBP9.47□□□□□ -0.89
CNOT2-240ENST00000552599 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
CNOT2-240ENST00000552599 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
CNOT2-240ENST00000552599 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
CNOT2-240ENST00000552599 ACEP12821 1306 aa9.47□□□□□ -0.89
CNOT2-240ENST00000552599 MAP2P11137 1827 aaKnown RBP9.47□□□□□ -0.89
CNOT2-240ENST00000552599 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
CNOT2-240ENST00000552599 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.89
CNOT2-240ENST00000552599 RUNDC1Q96C34 613 aa9.46□□□□□ -0.89
CNOT2-240ENST00000552599 KLHL42Q9P2K6 505 aa9.46□□□□□ -0.89
CNOT2-240ENST00000552599 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
CNOT2-240ENST00000552599 CD44P16070 742 aaKnown RBP9.46□□□□□ -0.9
CNOT2-240ENST00000552599 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
CNOT2-240ENST00000552599 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
CNOT2-240ENST00000552599 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
CNOT2-240ENST00000552599 CHD2O14647 1828 aaKnown RBP9.46□□□□□ -0.9
CNOT2-240ENST00000552599 PNPLA6Q8IY17 1366 aa9.46□□□□□ -0.9
CNOT2-240ENST00000552599 PIK3R4Q99570 1358 aa9.46□□□□□ -0.9
CNOT2-240ENST00000552599 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
CNOT2-240ENST00000552599 MFSD10Q14728 455 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 B4GALNT3Q6L9W6 998 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 PMFBP1Q8TBY8 1022 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
CNOT2-240ENST00000552599 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 PDE4AP27815 886 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
CNOT2-240ENST00000552599 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
CNOT2-240ENST00000552599 TMEM106CQ9BVX2 250 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 USP6P35125 1406 aa9.45□□□□□ -0.9
CNOT2-240ENST00000552599 TTC21BQ7Z4L5 1316 aa9.44□□□□□ -0.9
CNOT2-240ENST00000552599 COG3Q96JB2 828 aa9.44□□□□□ -0.9
CNOT2-240ENST00000552599 NALCNQ8IZF0 1738 aa9.44□□□□□ -0.9
CNOT2-240ENST00000552599 NPHP4O75161 1426 aaPredicted RBP9.44□□□□□ -0.9
CNOT2-240ENST00000552599 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
CNOT2-240ENST00000552599 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
CNOT2-240ENST00000552599 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
CNOT2-240ENST00000552599 PLIN1O60240 522 aa9.43□□□□□ -0.9
CNOT2-240ENST00000552599 TRMT2AQ8IZ69 625 aaKnown RBP9.43□□□□□ -0.9
CNOT2-240ENST00000552599 FMN2Q9NZ56 1722 aa9.43□□□□□ -0.9
CNOT2-240ENST00000552599 KCNA1Q09470 495 aa9.43□□□□□ -0.9
CNOT2-240ENST00000552599 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 SSH2Q76I76 1423 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 RBM47A0AV96 593 aaKnown RBP9.42□□□□□ -0.9
CNOT2-240ENST00000552599 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 LRRC7Q96NW7 1537 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
CNOT2-240ENST00000552599 CDK12Q9NYV4 1490 aaPredicted RBP9.42□□□□□ -0.9
CNOT2-240ENST00000552599 PPFIA4O75335 1185 aa9.41□□□□□ -0.9
CNOT2-240ENST00000552599 NGDNQ8NEJ9 315 aaKnown RBP9.41□□□□□ -0.9
CNOT2-240ENST00000552599 CDCA7Q9BWT1 371 aaPredicted RBP9.41□□□□□ -0.9
CNOT2-240ENST00000552599 EXOC6Q8TAG9 804 aa9.41□□□□□ -0.9
CNOT2-240ENST00000552599 ANKARQ7Z5J8 1434 aa9.4□□□□□ -0.9
CNOT2-240ENST00000552599 TCF3P15923 654 aa9.4□□□□□ -0.9
CNOT2-240ENST00000552599 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
CNOT2-240ENST00000552599 HMOX1P09601 288 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 IL13P35225 146 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 C20orf194Q5TEA3 1177 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 RPS6KL1Q9Y6S9 549 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 TMPOP42166 694 aaKnown RBP9.39□□□□□ -0.91
CNOT2-240ENST00000552599 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
CNOT2-240ENST00000552599 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
CNOT2-240ENST00000552599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.39□□□□□ -0.919e-8■■■□□ 14.9
CNOT2-240ENST00000552599 PEAK1Q9H792 1746 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 PNMA2Q9UL42 364 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 PAX3P23760 479 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
CNOT2-240ENST00000552599 NWD1Q149M9 1564 aa9.37□□□□□ -0.91
CNOT2-240ENST00000552599 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNOT2-240ENST00000552599 BCAR3O75815 825 aa9.37□□□□□ -0.91
CNOT2-240ENST00000552599 FCHSD2O94868 740 aa9.37□□□□□ -0.91
CNOT2-240ENST00000552599 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms