RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
ITGA5-211ENST00000552564 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
ITGA5-211ENST00000552564 GOLGA6L9A6NEM1 432 aa16.43■□□□□ 0.22
ITGA5-211ENST00000552564 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
ITGA5-211ENST00000552564 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
ITGA5-211ENST00000552564 TAF4BQ92750 862 aa16.43■□□□□ 0.22
ITGA5-211ENST00000552564 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
ITGA5-211ENST00000552564 SEPT7Q16181 437 aaKnown RBP16.43■□□□□ 0.22
ITGA5-211ENST00000552564 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
ITGA5-211ENST00000552564 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
ITGA5-211ENST00000552564 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
ITGA5-211ENST00000552564 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
ITGA5-211ENST00000552564 PRIMPOLQ96LW4 560 aa16.42■□□□□ 0.22
ITGA5-211ENST00000552564 ATP10BO94823 1461 aa16.42■□□□□ 0.22
ITGA5-211ENST00000552564 NSD2O96028 1365 aa16.42■□□□□ 0.22
ITGA5-211ENST00000552564 NEFHP12036 1026 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 EZRP15311 586 aaKnown RBP16.41■□□□□ 0.22
ITGA5-211ENST00000552564 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
ITGA5-211ENST00000552564 JAKMIP3Q5VZ66 844 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
ITGA5-211ENST00000552564 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
ITGA5-211ENST00000552564 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 FANCAO15360 1455 aa16.41■□□□□ 0.22
ITGA5-211ENST00000552564 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
ITGA5-211ENST00000552564 MSH5O43196 834 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 KIF5CO60282 957 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
ITGA5-211ENST00000552564 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.22
ITGA5-211ENST00000552564 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.22
ITGA5-211ENST00000552564 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.22
ITGA5-211ENST00000552564 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
ITGA5-211ENST00000552564 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
ITGA5-211ENST00000552564 DDX11Q96FC9 970 aa16.39■□□□□ 0.21
ITGA5-211ENST00000552564 DUOX2Q9NRD8 1548 aa16.39■□□□□ 0.21
ITGA5-211ENST00000552564 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
ITGA5-211ENST00000552564 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
ITGA5-211ENST00000552564 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
ITGA5-211ENST00000552564 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
ITGA5-211ENST00000552564 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
ITGA5-211ENST00000552564 RALGAPBQ86X10 1494 aa16.38■□□□□ 0.21
ITGA5-211ENST00000552564 PTPRCP08575 1304 aa16.38■□□□□ 0.21
ITGA5-211ENST00000552564 CABP4P57796 275 aa16.38■□□□□ 0.21
ITGA5-211ENST00000552564 IL16Q14005 1332 aa16.38■□□□□ 0.21
ITGA5-211ENST00000552564 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
ITGA5-211ENST00000552564 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
ITGA5-211ENST00000552564 SPA17Q15506 151 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 TUBB4AP04350 444 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 MICALCLQ6ZW33 695 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 SHANK2Q9UPX8 1470 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 CETN2P41208 172 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
ITGA5-211ENST00000552564 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
ITGA5-211ENST00000552564 PLCH2O75038 1416 aa16.37■□□□□ 0.21
ITGA5-211ENST00000552564 TOP1P11387 765 aaKnown RBP16.36■□□□□ 0.21
ITGA5-211ENST00000552564 PYM1Q9BRP8 204 aaKnown RBP16.36■□□□□ 0.21
ITGA5-211ENST00000552564 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 THEMISQ8N1K5 641 aaPredicted RBP16.36■□□□□ 0.21
ITGA5-211ENST00000552564 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 PAXBP1Q9Y5B6 917 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
ITGA5-211ENST00000552564 DESP17661 470 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 CASQ1P31415 396 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 SIL1Q9H173 461 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
ITGA5-211ENST00000552564 TDO2P48775 406 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
ITGA5-211ENST00000552564 FKBP15Q5T1M5 1219 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 IL1RAPL2Q9NP60 686 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
ITGA5-211ENST00000552564 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
ITGA5-211ENST00000552564 KIF20AO95235 890 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 NUP160Q12769 1436 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 TNNT1P13805 278 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 GBP2P32456 591 aaPredicted RBP16.34■□□□□ 0.21
ITGA5-211ENST00000552564 NUTM2GQ5VZR2 741 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 STX1AQ16623 288 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
ITGA5-211ENST00000552564 BTBD11A6QL63 1104 aa16.33■□□□□ 0.21
ITGA5-211ENST00000552564 SKIDA1Q1XH10 827 aa16.33■□□□□ 0.21
ITGA5-211ENST00000552564 USO1O60763 962 aaKnown RBP16.33■□□□□ 0.2
ITGA5-211ENST00000552564 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
ITGA5-211ENST00000552564 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
ITGA5-211ENST00000552564 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
ITGA5-211ENST00000552564 CCDC150Q8NCX0 1101 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms