RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
TUBA1C-209ENST00000552448 CRB1P82279 1406 aa13.63□□□□□ -0.23
TUBA1C-209ENST00000552448 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
TUBA1C-209ENST00000552448 ABCC4O15439 1325 aa13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 HOXC9P31274 260 aa13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
TUBA1C-209ENST00000552448 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
TUBA1C-209ENST00000552448 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
TUBA1C-209ENST00000552448 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
TUBA1C-209ENST00000552448 RBM25P49756 843 aaKnown RBP13.61□□□□□ -0.23
TUBA1C-209ENST00000552448 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 DYNC1I1O14576 645 aa13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 IP6K1Q92551 441 aa13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
TUBA1C-209ENST00000552448 HAP1P54257 671 aaPredicted RBP13.59□□□□□ -0.23
TUBA1C-209ENST00000552448 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
TUBA1C-209ENST00000552448 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
TUBA1C-209ENST00000552448 PXDNQ92626 1479 aa13.58□□□□□ -0.24
TUBA1C-209ENST00000552448 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
TUBA1C-209ENST00000552448 ABCC6O95255 1503 aa13.58□□□□□ -0.24
TUBA1C-209ENST00000552448 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
TUBA1C-209ENST00000552448 GCP02774 474 aa13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 KLHL40Q2TBA0 621 aa13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 NOL7Q9UMY1 257 aaKnown RBP13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
TUBA1C-209ENST00000552448 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
TUBA1C-209ENST00000552448 ZNF445P59923 1031 aa13.56□□□□□ -0.24
TUBA1C-209ENST00000552448 NUCB1Q02818 461 aa13.56□□□□□ -0.24
TUBA1C-209ENST00000552448 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
TUBA1C-209ENST00000552448 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
TUBA1C-209ENST00000552448 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 RGS12O14924 1447 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 LRRC37A3O60309 1634 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 CRYBG1Q9Y4K1 1723 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 INTS3Q68E01 1043 aaKnown RBP13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
TUBA1C-209ENST00000552448 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
TUBA1C-209ENST00000552448 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
TUBA1C-209ENST00000552448 C1orf115Q9H7X2 142 aa13.54□□□□□ -0.24
TUBA1C-209ENST00000552448 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
TUBA1C-209ENST00000552448 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 PTPRCP08575 1304 aa13.53□□□□□ -0.24
TUBA1C-209ENST00000552448 RBM10P98175 930 aaKnown RBP13.52□□□□□ -0.25
TUBA1C-209ENST00000552448 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.25
TUBA1C-209ENST00000552448 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
TUBA1C-209ENST00000552448 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
TUBA1C-209ENST00000552448 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
TUBA1C-209ENST00000552448 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
TUBA1C-209ENST00000552448 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
TUBA1C-209ENST00000552448 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
TUBA1C-209ENST00000552448 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 UQCRHP07919 91 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
TUBA1C-209ENST00000552448 CPDO75976 1380 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 ZKSCAN5Q9Y2L8 839 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 COL18A1P39060 1754 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
TUBA1C-209ENST00000552448 NUCB2P80303 420 aa13.48□□□□□ -0.25
TUBA1C-209ENST00000552448 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
TUBA1C-209ENST00000552448 CCDC94Q9BW85 323 aaPredicted RBP13.48□□□□□ -0.25
TUBA1C-209ENST00000552448 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
TUBA1C-209ENST00000552448 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
TUBA1C-209ENST00000552448 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 DMTNQ08495 405 aa13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 G2E3Q7L622 706 aa13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
TUBA1C-209ENST00000552448 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms