RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
RAB3IP-216ENST00000552199 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
RAB3IP-216ENST00000552199 PXDNQ92626 1479 aa17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 RNMTO43148 476 aaKnown RBP17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 TEFQ10587 303 aa17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 NBR1Q14596 966 aa17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.4
RAB3IP-216ENST00000552199 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 ERBB3P21860 1342 aa17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 KDM4FA0A1W2PPD8 638 aa17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 OVOS2A0A0G2JMS6 1433 aa17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 HOXB7P09629 217 aa17.51■□□□□ 0.39
RAB3IP-216ENST00000552199 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
RAB3IP-216ENST00000552199 CHMP4AQ9BY43 222 aa17.5■□□□□ 0.39
RAB3IP-216ENST00000552199 COL18A1P39060 1754 aa17.5■□□□□ 0.39
RAB3IP-216ENST00000552199 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
RAB3IP-216ENST00000552199 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
RAB3IP-216ENST00000552199 KCNQ3O43525 872 aa17.49■□□□□ 0.39
RAB3IP-216ENST00000552199 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
RAB3IP-216ENST00000552199 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
RAB3IP-216ENST00000552199 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
RAB3IP-216ENST00000552199 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
RAB3IP-216ENST00000552199 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 HMMRO75330 724 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 GNAI2P04899 355 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 BECN1Q14457 450 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 GNAI3P08754 354 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
RAB3IP-216ENST00000552199 ADAMTS7Q9UKP4 1686 aa17.46■□□□□ 0.39
RAB3IP-216ENST00000552199 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
RAB3IP-216ENST00000552199 EIF2S2P20042 333 aaKnown RBP17.46■□□□□ 0.39
RAB3IP-216ENST00000552199 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
RAB3IP-216ENST00000552199 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
RAB3IP-216ENST00000552199 ABCC6O95255 1503 aa17.45■□□□□ 0.38
RAB3IP-216ENST00000552199 NLRP2Q9NX02 1062 aa17.45■□□□□ 0.38
RAB3IP-216ENST00000552199 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
RAB3IP-216ENST00000552199 BRINP3Q76B58 766 aa17.43■□□□□ 0.38
RAB3IP-216ENST00000552199 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
RAB3IP-216ENST00000552199 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
RAB3IP-216ENST00000552199 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
RAB3IP-216ENST00000552199 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
RAB3IP-216ENST00000552199 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
RAB3IP-216ENST00000552199 CPDO75976 1380 aa17.42■□□□□ 0.38
RAB3IP-216ENST00000552199 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■□□□ 13.1
RAB3IP-216ENST00000552199 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
RAB3IP-216ENST00000552199 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
RAB3IP-216ENST00000552199 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
RAB3IP-216ENST00000552199 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
RAB3IP-216ENST00000552199 MEGF6O75095 1541 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 APBB1O00213 710 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 CDC45O75419 566 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 PHKG2P15735 406 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
RAB3IP-216ENST00000552199 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
RAB3IP-216ENST00000552199 SLAIN2Q9P270 581 aa17.38■□□□□ 0.37
RAB3IP-216ENST00000552199 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
RAB3IP-216ENST00000552199 ZNF335Q9H4Z2 1342 aaPredicted RBP17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 BEND3Q5T5X7 828 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 ANXA1P04083 346 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
RAB3IP-216ENST00000552199 ADCY9O60503 1353 aa17.36■□□□□ 0.37
RAB3IP-216ENST00000552199 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
RAB3IP-216ENST00000552199 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
RAB3IP-216ENST00000552199 EIF5BO60841 1220 aaKnown RBP17.35■□□□□ 0.37
RAB3IP-216ENST00000552199 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
RAB3IP-216ENST00000552199 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
RAB3IP-216ENST00000552199 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
RAB3IP-216ENST00000552199 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
RAB3IP-216ENST00000552199 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
RAB3IP-216ENST00000552199 LRRCC1Q9C099 1032 aa17.34■□□□□ 0.37
RAB3IP-216ENST00000552199 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
RAB3IP-216ENST00000552199 IBTKQ9P2D0 1353 aaPredicted RBP17.34■□□□□ 0.37
RAB3IP-216ENST00000552199 SDSP20132 328 aa17.33■□□□□ 0.37
RAB3IP-216ENST00000552199 PROSER3Q2NL68 480 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms