RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 C5P01031 1676 aa25.93■■□□□ 1.74
GPN3-210ENST00000552180 PNPLA7Q6ZV29 1317 aa25.92■■□□□ 1.74
GPN3-210ENST00000552180 MYBBP1AQ9BQG0 1328 aaKnown RBP25.92■■□□□ 1.74
GPN3-210ENST00000552180 QSER1Q2KHR3 1735 aa25.92■■□□□ 1.74
GPN3-210ENST00000552180 SLC4A9Q96Q91 983 aa25.92■■□□□ 1.74
GPN3-210ENST00000552180 SLC52A2Q9HAB3 445 aa25.92■■□□□ 1.74
GPN3-210ENST00000552180 TFCP2L1Q9NZI6 479 aa25.92■■□□□ 1.74
GPN3-210ENST00000552180 ITPK1Q13572 414 aa25.91■■□□□ 1.74
GPN3-210ENST00000552180 MRC1P22897 1456 aa25.91■■□□□ 1.74
GPN3-210ENST00000552180 TUBGCP6Q96RT7 1819 aa25.91■■□□□ 1.74
GPN3-210ENST00000552180 ZBTB7AO95365 584 aa25.9■■□□□ 1.74
GPN3-210ENST00000552180 HMGB2P26583 209 aaKnown RBP25.9■■□□□ 1.74
GPN3-210ENST00000552180 IL17REQ8NFR9 667 aa25.9■■□□□ 1.74
GPN3-210ENST00000552180 PRKRIP1Q9H875 184 aaPredicted RBP25.9■■□□□ 1.74
GPN3-210ENST00000552180 MAP3K5Q99683 1374 aa25.9■■□□□ 1.74
GPN3-210ENST00000552180 VIRMAQ69YN4 1812 aaKnown RBP25.89■■□□□ 1.74
GPN3-210ENST00000552180 GNAT3A8MTJ3 354 aa25.89■■□□□ 1.74
GPN3-210ENST00000552180 LINC00116Q8NCU8 138 aa25.89■■□□□ 1.74
GPN3-210ENST00000552180 ATP6V1AP38606 617 aa25.88■■□□□ 1.73
GPN3-210ENST00000552180 C4BP0C0L5 1744 aa25.87■■□□□ 1.73
GPN3-210ENST00000552180 ZNF831Q5JPB2 1677 aa25.87■■□□□ 1.73
GPN3-210ENST00000552180 PTGER2P43116 358 aa25.86■■□□□ 1.73
GPN3-210ENST00000552180 PLEKHF1Q96S99 279 aa25.86■■□□□ 1.73
GPN3-210ENST00000552180 RBM42Q9BTD8 480 aaKnown RBP25.86■■□□□ 1.73
GPN3-210ENST00000552180 MTFR1LQ9H019 292 aa25.86■■□□□ 1.73
GPN3-210ENST00000552180 ATF5Q9Y2D1 282 aaPredicted RBP25.86■■□□□ 1.73
GPN3-210ENST00000552180 SGIP1Q9BQI5 828 aa25.85■■□□□ 1.73
GPN3-210ENST00000552180 AMIGO3Q86WK7 504 aa25.84■■□□□ 1.73
GPN3-210ENST00000552180 COL23A1Q86Y22 540 aaPredicted RBP25.84■■□□□ 1.73
GPN3-210ENST00000552180 SLC16A10Q8TF71 515 aa25.84■■□□□ 1.73
GPN3-210ENST00000552180 CEMIPQ8WUJ3 1361 aa25.83■■□□□ 1.73
GPN3-210ENST00000552180 PTCD1O75127 700 aaKnown RBP25.83■■□□□ 1.73
GPN3-210ENST00000552180 SLC39A6Q13433 755 aa25.81■■□□□ 1.72
GPN3-210ENST00000552180 AK7Q96M32 723 aa25.81■■□□□ 1.72
GPN3-210ENST00000552180 UBR3Q6ZT12 1888 aa25.79■■□□□ 1.72
GPN3-210ENST00000552180 SMIM5Q71RC9 77 aa25.79■■□□□ 1.72
GPN3-210ENST00000552180 FLAD1Q8NFF5 587 aa25.79■■□□□ 1.72
GPN3-210ENST00000552180 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
GPN3-210ENST00000552180 SIPA1L3O60292 1781 aaPredicted RBP25.78■■□□□ 1.72
GPN3-210ENST00000552180 HTATSF1O43719 755 aaKnown RBP25.78■■□□□ 1.72
GPN3-210ENST00000552180 TEFQ10587 303 aa25.78■■□□□ 1.72
GPN3-210ENST00000552180 RC3H1Q5TC82 1133 aaKnown RBP25.78■■□□□ 1.72
GPN3-210ENST00000552180 COL5A3P25940 1745 aaPredicted RBP25.77■■□□□ 1.72
GPN3-210ENST00000552180 KCPQ6ZWJ8 1503 aa25.77■■□□□ 1.72
GPN3-210ENST00000552180 CICQ96RK0 1608 aaPredicted RBP25.77■■□□□ 1.72
GPN3-210ENST00000552180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.76■■□□□ 1.71
GPN3-210ENST00000552180 SSFA2P28290 1259 aa25.76■■□□□ 1.71
GPN3-210ENST00000552180 PNNQ9H307 717 aaKnown RBP25.76■■□□□ 1.71
GPN3-210ENST00000552180 CNTNAP4Q9C0A0 1308 aa25.75■■□□□ 1.71
GPN3-210ENST00000552180 MCM10Q7L590 875 aa25.75■■□□□ 1.71
GPN3-210ENST00000552180 TJP1Q07157 1748 aa25.74■■□□□ 1.71
GPN3-210ENST00000552180 GNPATO15228 680 aa25.74■■□□□ 1.71
GPN3-210ENST00000552180 MSH5O43196 834 aa25.74■■□□□ 1.71
GPN3-210ENST00000552180 DCTN1Q14203 1278 aa25.74■■□□□ 1.71
GPN3-210ENST00000552180 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
GPN3-210ENST00000552180 RTF1Q92541 710 aaKnown RBP25.74■■□□□ 1.71
GPN3-210ENST00000552180 PPP1R1BQ9UD71 204 aaPredicted RBP25.74■■□□□ 1.71
GPN3-210ENST00000552180 MYH14Q7Z406 1995 aaKnown RBP25.73■■□□□ 1.71
GPN3-210ENST00000552180 NEFMP07197 916 aa25.73■■□□□ 1.71
GPN3-210ENST00000552180 ZNF790Q6PG37 636 aa25.73■■□□□ 1.71
GPN3-210ENST00000552180 UBR2Q8IWV8 1755 aa25.73■■□□□ 1.71
GPN3-210ENST00000552180 PHF14O94880 888 aa25.72■■□□□ 1.71
GPN3-210ENST00000552180 DNAJC10Q8IXB1 793 aa25.72■■□□□ 1.71
GPN3-210ENST00000552180 VSIG10Q8N0Z9 540 aa25.72■■□□□ 1.71
GPN3-210ENST00000552180 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
GPN3-210ENST00000552180 RPS6KA4O75676 772 aa25.71■■□□□ 1.71
GPN3-210ENST00000552180 CRKLP46109 303 aaKnown RBP25.71■■□□□ 1.71
GPN3-210ENST00000552180 INTS5Q6P9B9 1019 aaKnown RBP25.7■■□□□ 1.7
GPN3-210ENST00000552180 ARXQ96QS3 562 aa25.7■■□□□ 1.7
GPN3-210ENST00000552180 ADAMTS8Q9UP79 889 aa25.7■■□□□ 1.7
GPN3-210ENST00000552180 RTCBQ9Y3I0 505 aaKnown RBP25.7■■□□□ 1.7
GPN3-210ENST00000552180 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
GPN3-210ENST00000552180 BTBD11A6QL63 1104 aa25.69■■□□□ 1.7
GPN3-210ENST00000552180 KCNQ3O43525 872 aa25.69■■□□□ 1.7
GPN3-210ENST00000552180 CYP19A1P11511 503 aaPredicted RBP25.69■■□□□ 1.7
GPN3-210ENST00000552180 TTC5Q8N0Z6 440 aa25.69■■□□□ 1.7
GPN3-210ENST00000552180 ZNF496Q96IT1 587 aaPredicted RBP25.69■■□□□ 1.7
GPN3-210ENST00000552180 WDR43Q15061 677 aaKnown RBP eCLIP25.67■■□□□ 1.7
GPN3-210ENST00000552180 TRAPPC3LQ5T215 181 aa25.67■■□□□ 1.7
GPN3-210ENST00000552180 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
GPN3-210ENST00000552180 ADRA2BP18089 450 aa25.66■■□□□ 1.7
GPN3-210ENST00000552180 POLD1P28340 1107 aa25.66■■□□□ 1.7
GPN3-210ENST00000552180 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
GPN3-210ENST00000552180 TAF7Q15545 349 aaPredicted RBP25.65■■□□□ 1.7
GPN3-210ENST00000552180 CCDC184Q52MB2 194 aa25.65■■□□□ 1.7
GPN3-210ENST00000552180 FHDC1Q9C0D6 1143 aaPredicted RBP25.65■■□□□ 1.7
GPN3-210ENST00000552180 HEG1Q9ULI3 1381 aa25.65■■□□□ 1.7
GPN3-210ENST00000552180 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
GPN3-210ENST00000552180 CCDC146Q8IYE0 955 aa25.64■■□□□ 1.7
GPN3-210ENST00000552180 RUNDC1Q96C34 613 aa25.64■■□□□ 1.7
GPN3-210ENST00000552180 CCDC87Q9NVE4 849 aa25.64■■□□□ 1.7
GPN3-210ENST00000552180 FMNL2Q96PY5 1086 aa25.63■■□□□ 1.69
GPN3-210ENST00000552180 SYT17Q9BSW7 474 aa25.63■■□□□ 1.69
GPN3-210ENST00000552180 RIPK4P57078 832 aa25.62■■□□□ 1.69
GPN3-210ENST00000552180 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
GPN3-210ENST00000552180 TEX13AQ9BXU3 409 aaPredicted RBP25.6■■□□□ 1.69
GPN3-210ENST00000552180 MIS18AQ9NYP9 233 aa25.6■■□□□ 1.69
GPN3-210ENST00000552180 ZBTB1Q9Y2K1 713 aa25.6■■□□□ 1.69
GPN3-210ENST00000552180 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
GPN3-210ENST00000552180 ANP32CO43423 234 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms