RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
SNRPF-204ENST00000552085 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
SNRPF-204ENST00000552085 DALRD3Q5D0E6 543 aaKnown RBP17.92■□□□□ 0.46
SNRPF-204ENST00000552085 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
SNRPF-204ENST00000552085 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
SNRPF-204ENST00000552085 CD163L1Q9NR16 1453 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 SIK1P57059 783 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 TMF1P82094 1093 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
SNRPF-204ENST00000552085 HOXC9P31274 260 aa17.9■□□□□ 0.46
SNRPF-204ENST00000552085 RGS19P49795 217 aa17.9■□□□□ 0.46
SNRPF-204ENST00000552085 RAPGEF4Q8WZA2 1011 aa17.9■□□□□ 0.46
SNRPF-204ENST00000552085 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
SNRPF-204ENST00000552085 EDC4Q6P2E9 1401 aaKnown RBP17.89■□□□□ 0.45
SNRPF-204ENST00000552085 LBX1P52954 281 aa17.88■□□□□ 0.45
SNRPF-204ENST00000552085 PIGBQ92521 554 aa17.88■□□□□ 0.45
SNRPF-204ENST00000552085 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
SNRPF-204ENST00000552085 CNTNAP1P78357 1384 aa17.88■□□□□ 0.45
SNRPF-204ENST00000552085 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
SNRPF-204ENST00000552085 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
SNRPF-204ENST00000552085 AMPHP49418 695 aa17.87■□□□□ 0.45
SNRPF-204ENST00000552085 ITPK1Q13572 414 aa17.87■□□□□ 0.45
SNRPF-204ENST00000552085 NBPF6Q5VWK0 638 aa17.87■□□□□ 0.45
SNRPF-204ENST00000552085 USHBP1Q8N6Y0 703 aa17.87■□□□□ 0.45
SNRPF-204ENST00000552085 NBPF4Q96M43 638 aa17.87■□□□□ 0.45
SNRPF-204ENST00000552085 TRAPPC3LQ5T215 181 aa17.86■□□□□ 0.45
SNRPF-204ENST00000552085 RASSF7Q02833 373 aa17.85■□□□□ 0.45
SNRPF-204ENST00000552085 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
SNRPF-204ENST00000552085 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
SNRPF-204ENST00000552085 POTECB2RU33 542 aa17.84■□□□□ 0.45
SNRPF-204ENST00000552085 CYP27B1O15528 508 aa17.84■□□□□ 0.45
SNRPF-204ENST00000552085 GYS1P13807 737 aa17.84■□□□□ 0.45
SNRPF-204ENST00000552085 ATP6V1AP38606 617 aa17.84■□□□□ 0.45
SNRPF-204ENST00000552085 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
SNRPF-204ENST00000552085 LMNB1P20700 586 aa17.83■□□□□ 0.44
SNRPF-204ENST00000552085 WBP1LQ9NX94 342 aa17.83■□□□□ 0.44
SNRPF-204ENST00000552085 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
SNRPF-204ENST00000552085 CHRNA5P30532 468 aa17.81■□□□□ 0.44
SNRPF-204ENST00000552085 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
SNRPF-204ENST00000552085 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
SNRPF-204ENST00000552085 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
SNRPF-204ENST00000552085 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
SNRPF-204ENST00000552085 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
SNRPF-204ENST00000552085 VEGFBP49765 207 aa17.8■□□□□ 0.44
SNRPF-204ENST00000552085 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
SNRPF-204ENST00000552085 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
SNRPF-204ENST00000552085 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
SNRPF-204ENST00000552085 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
SNRPF-204ENST00000552085 FBLN1P23142 703 aa17.79■□□□□ 0.44
SNRPF-204ENST00000552085 RFC4P35249 363 aa17.79■□□□□ 0.44
SNRPF-204ENST00000552085 SLC12A5Q9H2X9 1139 aa17.78■□□□□ 0.44
SNRPF-204ENST00000552085 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
SNRPF-204ENST00000552085 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
SNRPF-204ENST00000552085 NKX1-1Q15270 411 aaPredicted RBP17.77■□□□□ 0.44
SNRPF-204ENST00000552085 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
SNRPF-204ENST00000552085 COG3Q96JB2 828 aa17.77■□□□□ 0.44
SNRPF-204ENST00000552085 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
SNRPF-204ENST00000552085 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
SNRPF-204ENST00000552085 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
SNRPF-204ENST00000552085 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
SNRPF-204ENST00000552085 PASKQ96RG2 1323 aa17.74■□□□□ 0.43
SNRPF-204ENST00000552085 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
SNRPF-204ENST00000552085 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
SNRPF-204ENST00000552085 KDRP35968 1356 aa17.74■□□□□ 0.43
SNRPF-204ENST00000552085 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
SNRPF-204ENST00000552085 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
SNRPF-204ENST00000552085 DDR1Q08345 913 aa17.73■□□□□ 0.43
SNRPF-204ENST00000552085 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
SNRPF-204ENST00000552085 TMEM88BA6NKF7 163 aa17.72■□□□□ 0.43
SNRPF-204ENST00000552085 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
SNRPF-204ENST00000552085 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
SNRPF-204ENST00000552085 ROCK2O75116 1388 aaKnown RBP17.71■□□□□ 0.43
SNRPF-204ENST00000552085 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
SNRPF-204ENST00000552085 PDE4DIPQ5VU43 2346 aa17.7■□□□□ 0.42
SNRPF-204ENST00000552085 FKBP8Q14318 412 aa17.7■□□□□ 0.42
SNRPF-204ENST00000552085 INSRP06213 1382 aa17.69■□□□□ 0.42
SNRPF-204ENST00000552085 NFKBIEO00221 500 aa17.69■□□□□ 0.42
SNRPF-204ENST00000552085 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
SNRPF-204ENST00000552085 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
SNRPF-204ENST00000552085 SRP68Q9UHB9 627 aaKnown RBP17.69■□□□□ 0.42
SNRPF-204ENST00000552085 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
SNRPF-204ENST00000552085 SCN4AP35499 1836 aa17.68■□□□□ 0.42
SNRPF-204ENST00000552085 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
SNRPF-204ENST00000552085 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
SNRPF-204ENST00000552085 TNRC18O15417 2968 aaPredicted RBP17.67■□□□□ 0.42
SNRPF-204ENST00000552085 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
SNRPF-204ENST00000552085 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
SNRPF-204ENST00000552085 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
SNRPF-204ENST00000552085 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
SNRPF-204ENST00000552085 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
SNRPF-204ENST00000552085 THSD7BQ9C0I4 1608 aa17.66■□□□□ 0.42
SNRPF-204ENST00000552085 RASSF10A6NK89 507 aa17.66■□□□□ 0.42
SNRPF-204ENST00000552085 ERFEQ4G0M1 354 aa17.66■□□□□ 0.42
SNRPF-204ENST00000552085 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
SNRPF-204ENST00000552085 NRXN2Q9P2S2 1712 aa17.66■□□□□ 0.42
SNRPF-204ENST00000552085 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms