RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 SLC4A3P48751 1232 aa6.72□□□□□ -1.33
CCNT1-204ENST00000551989 SKOR2Q2VWA4 1001 aaPredicted RBP6.72□□□□□ -1.33
CCNT1-204ENST00000551989 RSPH6AQ9H0K4 717 aa6.72□□□□□ -1.33
CCNT1-204ENST00000551989 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
CCNT1-204ENST00000551989 LRRC37A3O60309 1634 aa6.72□□□□□ -1.33
CCNT1-204ENST00000551989 KIF13AQ9H1H9 1805 aa6.71□□□□□ -1.33
CCNT1-204ENST00000551989 FAM208AQ9UK61 1670 aaKnown RBP6.71□□□□□ -1.33
CCNT1-204ENST00000551989 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
CCNT1-204ENST00000551989 ZNF853P0CG23 659 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 MCM4P33991 863 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 CHD1LQ86WJ1 897 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 TMEM57Q8N5G2 664 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 CDK19Q9BWU1 502 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.34
CCNT1-204ENST00000551989 AK9Q5TCS8 1911 aa6.71□□□□□ -1.34
CCNT1-204ENST00000551989 MINK1Q8N4C8 1332 aaPredicted RBP6.71□□□□□ -1.34
CCNT1-204ENST00000551989 IBTKQ9P2D0 1353 aaPredicted RBP6.7□□□□□ -1.34
CCNT1-204ENST00000551989 RAPGEF3O95398 923 aa6.7□□□□□ -1.34
CCNT1-204ENST00000551989 POTEEQ6S8J3 1075 aa6.7□□□□□ -1.34
CCNT1-204ENST00000551989 TSR2Q969E8 191 aaKnown RBP6.7□□□□□ -1.34
CCNT1-204ENST00000551989 SOS1Q07889 1333 aaPredicted RBP6.7□□□□□ -1.34
CCNT1-204ENST00000551989 ARHGEF10O15013 1369 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 FSD2A1L4K1 749 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 GOLGA6L3A6NEY3 463 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 WASLO00401 505 aaPredicted RBP6.69□□□□□ -1.34
CCNT1-204ENST00000551989 STK25O00506 426 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 VAMP4O75379 141 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 PRKAR2BP31323 418 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 MRE11P49959 708 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 LSM11P83369 360 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCNT1-204ENST00000551989 MRPL50Q8N5N7 158 aaKnown RBP6.69□□□□□ -1.34
CCNT1-204ENST00000551989 SLKQ9H2G2 1235 aaPredicted RBP6.69□□□□□ -1.34
CCNT1-204ENST00000551989 POLKQ9UBT6 870 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 PTPRCP08575 1304 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 TTC21BQ7Z4L5 1316 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 RTL1A6NKG5 1358 aa6.69□□□□□ -1.34
CCNT1-204ENST00000551989 OVOS2A0A0J9YW53 1432 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 OVOS2Q6IE36 1432 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 PXDNLA1KZ92 1463 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 KDM4FA0A1W2PPD8 638 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 GOLGA6L22H0YM25 854 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 ZBTB7BO15156 539 aaPredicted RBP6.68□□□□□ -1.34
CCNT1-204ENST00000551989 CDC45O75419 566 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 IL13P35225 146 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 DDIT3P35638 169 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 PBX2P40425 430 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CCNT1-204ENST00000551989 CLEC17AQ6ZS10 378 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 RPAP2Q8IXW5 612 aaPredicted RBP6.68□□□□□ -1.34
CCNT1-204ENST00000551989 COG3Q96JB2 828 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 CABP1Q9NZU7 370 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 TNNQ9UQP3 1299 aa6.68□□□□□ -1.34
CCNT1-204ENST00000551989 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
CCNT1-204ENST00000551989 RGL2O15211 777 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 EPB41L2O43491 1005 aaKnown RBP6.67□□□□□ -1.34
CCNT1-204ENST00000551989 NUDT7P0C024 238 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 RABEP1Q15276 862 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
CCNT1-204ENST00000551989 CASC1Q6TDU7 716 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 STK26Q9P289 416 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 PCDHGA4Q9Y5G9 962 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 USP31Q70CQ4 1352 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 XRN1Q8IZH2 1706 aaKnown RBP6.67□□□□□ -1.34
CCNT1-204ENST00000551989 PEAK1Q9H792 1746 aa6.67□□□□□ -1.34
CCNT1-204ENST00000551989 PHRF1Q9P1Y6 1649 aaKnown RBP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 K7ELQ4 463 aaPredicted RBP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 TRAK2O60296 914 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 ECM2O94769 699 aaPredicted RBP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 HSP90AB1P08238 724 aaKnown RBP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 SAFB2Q14151 953 aaKnown RBP eCLIP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 RAB3GAP1Q15042 981 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 INTS3Q68E01 1043 aaKnown RBP6.66□□□□□ -1.34
CCNT1-204ENST00000551989 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 BRPF3Q9ULD4 1205 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 LHX6Q9UPM6 363 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 TTC21AQ8NDW8 1320 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 PLEKHG1Q9ULL1 1385 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 SSH2Q76I76 1423 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 PTPRUQ92729 1446 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 ATP10DQ9P241 1426 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 SLIT1O75093 1534 aa6.66□□□□□ -1.34
CCNT1-204ENST00000551989 HMMRO75330 724 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 PPP1R37O75864 691 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 NUCB2P80303 420 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 CHMP4AQ9BY43 222 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 LNPKQ9C0E8 428 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 DCTPP1Q9H773 170 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 CWC22Q9HCG8 908 aaKnown RBP6.65□□□□□ -1.34
CCNT1-204ENST00000551989 MBIPQ9NS73 344 aa6.65□□□□□ -1.34
CCNT1-204ENST00000551989 TNRQ92752 1358 aa6.65□□□□□ -1.35
CCNT1-204ENST00000551989 USP6P35125 1406 aa6.65□□□□□ -1.35
CCNT1-204ENST00000551989 MARF1Q9Y4F3 1742 aaKnown RBP6.64□□□□□ -1.35
CCNT1-204ENST00000551989 CHD2O14647 1828 aaKnown RBP6.64□□□□□ -1.35
CCNT1-204ENST00000551989 PLEKHG3A1L390 1219 aa6.64□□□□□ -1.35
CCNT1-204ENST00000551989 HTATSF1O43719 755 aaKnown RBP6.64□□□□□ -1.35
CCNT1-204ENST00000551989 REC8O95072 547 aa6.64□□□□□ -1.35
CCNT1-204ENST00000551989 MCM2P49736 904 aa6.64□□□□□ -1.35
CCNT1-204ENST00000551989 ANKRD45Q5TZF3 282 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms