RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
SP1-204ENST00000551969 ZNF827Q17R98 1081 aa15.69■□□□□ 0.1
SP1-204ENST00000551969 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
SP1-204ENST00000551969 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
SP1-204ENST00000551969 NHSQ6T4R5 1651 aa15.68■□□□□ 0.1
SP1-204ENST00000551969 GNAT3A8MTJ3 354 aa15.68■□□□□ 0.1
SP1-204ENST00000551969 TEFQ10587 303 aa15.68■□□□□ 0.1
SP1-204ENST00000551969 MTHFSDQ2M296 383 aaKnown RBP15.68■□□□□ 0.1
SP1-204ENST00000551969 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
SP1-204ENST00000551969 ANKRD26Q9UPS8 1709 aa15.66■□□□□ 0.1
SP1-204ENST00000551969 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
SP1-204ENST00000551969 ARXQ96QS3 562 aa15.66■□□□□ 0.1
SP1-204ENST00000551969 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
SP1-204ENST00000551969 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
SP1-204ENST00000551969 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
SP1-204ENST00000551969 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
SP1-204ENST00000551969 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
SP1-204ENST00000551969 PDGFDQ9GZP0 370 aaPredicted RBP15.65■□□□□ 0.1
SP1-204ENST00000551969 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
SP1-204ENST00000551969 RGPD3A6NKT7 1758 aaPredicted RBP15.64■□□□□ 0.1
SP1-204ENST00000551969 RGPD4Q7Z3J3 1758 aa15.64■□□□□ 0.1
SP1-204ENST00000551969 SSFA2P28290 1259 aa15.64■□□□□ 0.09
SP1-204ENST00000551969 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
SP1-204ENST00000551969 GNPATO15228 680 aa15.63■□□□□ 0.09
SP1-204ENST00000551969 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
SP1-204ENST00000551969 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
SP1-204ENST00000551969 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
SP1-204ENST00000551969 SBF2Q86WG5 1849 aa15.63■□□□□ 0.09
SP1-204ENST00000551969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.62■□□□□ 0.09
SP1-204ENST00000551969 PHF14O94880 888 aa15.62■□□□□ 0.09
SP1-204ENST00000551969 PTGER2P43116 358 aa15.62■□□□□ 0.09
SP1-204ENST00000551969 COL23A1Q86Y22 540 aaPredicted RBP15.62■□□□□ 0.09
SP1-204ENST00000551969 RREB1Q92766 1687 aa15.62■□□□□ 0.09
SP1-204ENST00000551969 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
SP1-204ENST00000551969 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
SP1-204ENST00000551969 RFC4P35249 363 aa15.61■□□□□ 0.09
SP1-204ENST00000551969 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
SP1-204ENST00000551969 TEX13AQ9BXU3 409 aaPredicted RBP15.61■□□□□ 0.09
SP1-204ENST00000551969 RSPH6AQ9H0K4 717 aa15.61■□□□□ 0.09
SP1-204ENST00000551969 NUP188Q5SRE5 1749 aa15.6■□□□□ 0.09
SP1-204ENST00000551969 RGPD2P0DJD1 1756 aa15.6■□□□□ 0.09
SP1-204ENST00000551969 STARD3NLO95772 234 aa15.6■□□□□ 0.09
SP1-204ENST00000551969 LINC00116Q8NCU8 138 aa15.6■□□□□ 0.09
SP1-204ENST00000551969 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 ITPK1Q13572 414 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 VSIG10Q8N0Z9 540 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 NLGN1Q8N2Q7 840 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 FHDC1Q9C0D6 1143 aaPredicted RBP15.59■□□□□ 0.09
SP1-204ENST00000551969 MAP3K5Q99683 1374 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 BTAF1O14981 1849 aa15.59■□□□□ 0.09
SP1-204ENST00000551969 BTBD11A6QL63 1104 aa15.58■□□□□ 0.08
SP1-204ENST00000551969 RPS6KA4O75676 772 aa15.58■□□□□ 0.08
SP1-204ENST00000551969 WDR43Q15061 677 aaKnown RBP eCLIP15.58■□□□□ 0.08
SP1-204ENST00000551969 PHACTR3Q96KR7 559 aa15.58■□□□□ 0.08
SP1-204ENST00000551969 SYT17Q9BSW7 474 aa15.58■□□□□ 0.08
SP1-204ENST00000551969 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
SP1-204ENST00000551969 LRP5O75197 1615 aa15.57■□□□□ 0.08
SP1-204ENST00000551969 KDM6AO15550 1401 aaPredicted RBP15.57■□□□□ 0.08
SP1-204ENST00000551969 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
SP1-204ENST00000551969 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
SP1-204ENST00000551969 FMNL2Q96PY5 1086 aa15.56■□□□□ 0.08
SP1-204ENST00000551969 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
SP1-204ENST00000551969 PKD1L3Q7Z443 1732 aa15.56■□□□□ 0.08
SP1-204ENST00000551969 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
SP1-204ENST00000551969 ZPR1O75312 459 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 MSL1Q68DK7 614 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
SP1-204ENST00000551969 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
SP1-204ENST00000551969 GPR162Q16538 588 aa15.54■□□□□ 0.08
SP1-204ENST00000551969 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
SP1-204ENST00000551969 CCDC87Q9NVE4 849 aa15.54■□□□□ 0.08
SP1-204ENST00000551969 A0A087WZG4 1122 aa15.53■□□□□ 0.08
SP1-204ENST00000551969 LMOD3Q0VAK6 560 aa15.53■□□□□ 0.08
SP1-204ENST00000551969 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
SP1-204ENST00000551969 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
SP1-204ENST00000551969 SLC4A9Q96Q91 983 aa15.53■□□□□ 0.08
SP1-204ENST00000551969 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
SP1-204ENST00000551969 COL3A1P02461 1466 aaPredicted RBP15.52■□□□□ 0.08
SP1-204ENST00000551969 NFE2L2Q16236 605 aa15.52■□□□□ 0.08
SP1-204ENST00000551969 DNAJC10Q8IXB1 793 aa15.52■□□□□ 0.08
SP1-204ENST00000551969 PARP3Q9Y6F1 533 aa15.52■□□□□ 0.08
SP1-204ENST00000551969 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
SP1-204ENST00000551969 MCM10Q7L590 875 aa15.51■□□□□ 0.07
SP1-204ENST00000551969 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
SP1-204ENST00000551969 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
SP1-204ENST00000551969 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
SP1-204ENST00000551969 ANP32CO43423 234 aa15.5■□□□□ 0.07
SP1-204ENST00000551969 CYP19A1P11511 503 aaPredicted RBP15.5■□□□□ 0.07
SP1-204ENST00000551969 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SP1-204ENST00000551969 GRIN3BO60391 1043 aa15.49■□□□□ 0.07
SP1-204ENST00000551969 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
SP1-204ENST00000551969 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
SP1-204ENST00000551969 RIPK4P57078 832 aa15.49■□□□□ 0.07
SP1-204ENST00000551969 PAPPAQ13219 1627 aa15.48■□□□□ 0.07
SP1-204ENST00000551969 MMP10P09238 476 aa15.48■□□□□ 0.07
SP1-204ENST00000551969 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
SP1-204ENST00000551969 ZNF496Q96IT1 587 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms