RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
BRF1-219ENST00000551787 RBM42Q9BTD8 480 aaKnown RBP22.41■■□□□ 1.18
BRF1-219ENST00000551787 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
BRF1-219ENST00000551787 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
BRF1-219ENST00000551787 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
BRF1-219ENST00000551787 RNMTO43148 476 aaKnown RBP22.39■■□□□ 1.17
BRF1-219ENST00000551787 SLC4A9Q96Q91 983 aa22.39■■□□□ 1.17
BRF1-219ENST00000551787 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
BRF1-219ENST00000551787 PTCD1O75127 700 aaKnown RBP22.38■■□□□ 1.17
BRF1-219ENST00000551787 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
BRF1-219ENST00000551787 AK7Q96M32 723 aa22.38■■□□□ 1.17
BRF1-219ENST00000551787 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
BRF1-219ENST00000551787 SLC52A2Q9HAB3 445 aa22.36■■□□□ 1.17
BRF1-219ENST00000551787 PHF14O94880 888 aa22.35■■□□□ 1.17
BRF1-219ENST00000551787 SLC16A10Q8TF71 515 aa22.35■■□□□ 1.17
BRF1-219ENST00000551787 HMGB2P26583 209 aaKnown RBP22.34■■□□□ 1.17
BRF1-219ENST00000551787 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
BRF1-219ENST00000551787 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 FCHSD2O94868 740 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 SLC39A6Q13433 755 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 RALBP1Q15311 655 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 IL17REQ8NFR9 667 aa22.33■■□□□ 1.17
BRF1-219ENST00000551787 C5P01031 1676 aa22.33■■□□□ 1.16
BRF1-219ENST00000551787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.32■■□□□ 1.16
BRF1-219ENST00000551787 GNPATO15228 680 aa22.32■■□□□ 1.16
BRF1-219ENST00000551787 ARXQ96QS3 562 aa22.32■■□□□ 1.16
BRF1-219ENST00000551787 FHDC1Q9C0D6 1143 aaPredicted RBP22.31■■□□□ 1.16
BRF1-219ENST00000551787 MAP3K5Q99683 1374 aa22.3■■□□□ 1.16
BRF1-219ENST00000551787 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
BRF1-219ENST00000551787 FLAD1Q8NFF5 587 aa22.3■■□□□ 1.16
BRF1-219ENST00000551787 C4BP0C0L5 1744 aa22.3■■□□□ 1.16
BRF1-219ENST00000551787 POLD1P28340 1107 aa22.29■■□□□ 1.16
BRF1-219ENST00000551787 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
BRF1-219ENST00000551787 KLHL34Q8N239 644 aa22.28■■□□□ 1.16
BRF1-219ENST00000551787 SCN11AQ9UI33 1791 aa22.27■■□□□ 1.16
BRF1-219ENST00000551787 TEFQ10587 303 aa22.27■■□□□ 1.16
BRF1-219ENST00000551787 SYT17Q9BSW7 474 aa22.27■■□□□ 1.16
BRF1-219ENST00000551787 SSFA2P28290 1259 aa22.25■■□□□ 1.15
BRF1-219ENST00000551787 DNAJC10Q8IXB1 793 aa22.25■■□□□ 1.15
BRF1-219ENST00000551787 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
BRF1-219ENST00000551787 QSER1Q2KHR3 1735 aa22.25■■□□□ 1.15
BRF1-219ENST00000551787 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
BRF1-219ENST00000551787 RC3H1Q5TC82 1133 aaKnown RBP22.24■■□□□ 1.15
BRF1-219ENST00000551787 MCM10Q7L590 875 aa22.24■■□□□ 1.15
BRF1-219ENST00000551787 CRKLP46109 303 aaKnown RBP22.23■■□□□ 1.15
BRF1-219ENST00000551787 TRAPPC3LQ5T215 181 aa22.23■■□□□ 1.15
BRF1-219ENST00000551787 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
BRF1-219ENST00000551787 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
BRF1-219ENST00000551787 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
BRF1-219ENST00000551787 MRC1P22897 1456 aa22.22■■□□□ 1.15
BRF1-219ENST00000551787 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
BRF1-219ENST00000551787 TTC5Q8N0Z6 440 aa22.21■■□□□ 1.15
BRF1-219ENST00000551787 ARHGEF1Q92888 912 aaKnown RBP22.21■■□□□ 1.15
BRF1-219ENST00000551787 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
BRF1-219ENST00000551787 KCNQ3O43525 872 aa22.2■■□□□ 1.14
BRF1-219ENST00000551787 NEFMP07197 916 aa22.2■■□□□ 1.14
BRF1-219ENST00000551787 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
BRF1-219ENST00000551787 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
BRF1-219ENST00000551787 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
BRF1-219ENST00000551787 BTBD11A6QL63 1104 aa22.19■■□□□ 1.14
BRF1-219ENST00000551787 ZNF790Q6PG37 636 aa22.19■■□□□ 1.14
BRF1-219ENST00000551787 ZNF496Q96IT1 587 aaPredicted RBP22.19■■□□□ 1.14
BRF1-219ENST00000551787 CEMIPQ8WUJ3 1361 aa22.19■■□□□ 1.14
BRF1-219ENST00000551787 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
BRF1-219ENST00000551787 ZNF316A6NFI3 1004 aaPredicted RBP22.18■■□□□ 1.14
BRF1-219ENST00000551787 RFC4P35249 363 aa22.18■■□□□ 1.14
BRF1-219ENST00000551787 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
BRF1-219ENST00000551787 CYP19A1P11511 503 aaPredicted RBP22.17■■□□□ 1.14
BRF1-219ENST00000551787 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
BRF1-219ENST00000551787 CCDC87Q9NVE4 849 aa22.16■■□□□ 1.14
BRF1-219ENST00000551787 KCPQ6ZWJ8 1503 aa22.16■■□□□ 1.14
BRF1-219ENST00000551787 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
BRF1-219ENST00000551787 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
BRF1-219ENST00000551787 HTATSF1O43719 755 aaKnown RBP22.15■■□□□ 1.14
BRF1-219ENST00000551787 ADRA2BP18089 450 aa22.15■■□□□ 1.14
BRF1-219ENST00000551787 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
BRF1-219ENST00000551787 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
BRF1-219ENST00000551787 PNNQ9H307 717 aaKnown RBP22.15■■□□□ 1.14
BRF1-219ENST00000551787 MIS18AQ9NYP9 233 aa22.15■■□□□ 1.14
BRF1-219ENST00000551787 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
BRF1-219ENST00000551787 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.14
BRF1-219ENST00000551787 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
BRF1-219ENST00000551787 THUMPD2Q9BTF0 503 aaKnown RBP22.14■■□□□ 1.13
BRF1-219ENST00000551787 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.13
BRF1-219ENST00000551787 CANXP27824 592 aaKnown RBP22.13■■□□□ 1.13
BRF1-219ENST00000551787 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
BRF1-219ENST00000551787 ZBTB1Q9Y2K1 713 aa22.13■■□□□ 1.13
BRF1-219ENST00000551787 COL5A3P25940 1745 aaPredicted RBP22.13■■□□□ 1.13
BRF1-219ENST00000551787 UTRNP46939 3433 aa22.12■■□□□ 1.13
BRF1-219ENST00000551787 TJP1Q07157 1748 aa22.12■■□□□ 1.13
BRF1-219ENST00000551787 MMP10P09238 476 aa22.12■■□□□ 1.13
BRF1-219ENST00000551787 HEG1Q9ULI3 1381 aa22.12■■□□□ 1.13
BRF1-219ENST00000551787 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
BRF1-219ENST00000551787 STARD3NLO95772 234 aa22.11■■□□□ 1.13
BRF1-219ENST00000551787 GYS1P13807 737 aa22.11■■□□□ 1.13
BRF1-219ENST00000551787 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.13
BRF1-219ENST00000551787 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
BRF1-219ENST00000551787 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
BRF1-219ENST00000551787 NLGN1Q8N2Q7 840 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms