RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 ANAPC15P60006 121 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 MIS18AQ9NYP9 233 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 HTATSF1O43719 755 aaKnown RBP28.85■■■□□ 2.21
NPAS3-211ENST00000551634 ESYT1Q9BSJ8 1104 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 LRRCC1Q9C099 1032 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 SBNO1A3KN83 1393 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 FLT4P35916 1363 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 TUBGCP6Q96RT7 1819 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 MCCP23508 829 aa28.85■■■□□ 2.21
NPAS3-211ENST00000551634 NEK4P51957 841 aa28.84■■■□□ 2.21
NPAS3-211ENST00000551634 GPT2Q8TD30 523 aa28.84■■■□□ 2.21
NPAS3-211ENST00000551634 UBR1Q8IWV7 1749 aa28.84■■■□□ 2.21
NPAS3-211ENST00000551634 TMX3Q96JJ7 454 aa28.83■■■□□ 2.21
NPAS3-211ENST00000551634 SOS1Q07889 1333 aaPredicted RBP28.83■■■□□ 2.21
NPAS3-211ENST00000551634 CUL4AQ13619 759 aa28.83■■■□□ 2.21
NPAS3-211ENST00000551634 IL17RAQ96F46 866 aa28.83■■■□□ 2.21
NPAS3-211ENST00000551634 FOXO3O43524 673 aa28.82■■■□□ 2.2
NPAS3-211ENST00000551634 TPM2P07951 284 aa28.82■■■□□ 2.2
NPAS3-211ENST00000551634 PDLIM2Q96JY6 352 aa28.82■■■□□ 2.2
NPAS3-211ENST00000551634 RRP9O43818 475 aaKnown RBP28.82■■■□□ 2.2
NPAS3-211ENST00000551634 ATP8B2P98198 1209 aa28.82■■■□□ 2.2
NPAS3-211ENST00000551634 SRCIN1Q9C0H9 1055 aa28.82■■■□□ 2.2
NPAS3-211ENST00000551634 MX1P20591 662 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 EXOC6BQ9Y2D4 811 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 CCDC30Q5VVM6 783 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 INTS4Q96HW7 963 aaKnown RBP28.81■■■□□ 2.2
NPAS3-211ENST00000551634 RBSNQ9H1K0 784 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 STAP2Q9UGK3 403 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 IGSF1Q8N6C5 1336 aa28.81■■■□□ 2.2
NPAS3-211ENST00000551634 MBD3O95983 291 aa28.8■■■□□ 2.2
NPAS3-211ENST00000551634 MSNP26038 577 aaKnown RBP28.8■■■□□ 2.2
NPAS3-211ENST00000551634 EPB41L2O43491 1005 aaKnown RBP28.8■■■□□ 2.2
NPAS3-211ENST00000551634 PLEKHG1Q9ULL1 1385 aa28.8■■■□□ 2.2
NPAS3-211ENST00000551634 PRIM1P49642 420 aaKnown RBP28.79■■■□□ 2.2
NPAS3-211ENST00000551634 FLIIQ13045 1269 aa28.79■■■□□ 2.2
NPAS3-211ENST00000551634 CACNA1FO60840 1977 aa28.79■■■□□ 2.2
NPAS3-211ENST00000551634 LRSAM1Q6UWE0 723 aa28.78■■■□□ 2.2
NPAS3-211ENST00000551634 BRD1O95696 1058 aa28.78■■■□□ 2.2
NPAS3-211ENST00000551634 LRRC37A3O60309 1634 aa28.78■■■□□ 2.2
NPAS3-211ENST00000551634 CHMLP26374 656 aa28.78■■■□□ 2.2
NPAS3-211ENST00000551634 AOX1Q06278 1338 aa28.77■■■□□ 2.2
NPAS3-211ENST00000551634 XRN1Q8IZH2 1706 aaKnown RBP28.77■■■□□ 2.2
NPAS3-211ENST00000551634 FAM208AQ9UK61 1670 aaKnown RBP28.76■■■□□ 2.2
NPAS3-211ENST00000551634 RIMS1Q86UR5 1692 aaKnown RBP28.76■■■□□ 2.19
NPAS3-211ENST00000551634 OFD1O75665 1012 aa28.76■■■□□ 2.19
NPAS3-211ENST00000551634 EYA1Q99502 592 aa28.76■■■□□ 2.19
NPAS3-211ENST00000551634 PTPRUQ92729 1446 aa28.76■■■□□ 2.19
NPAS3-211ENST00000551634 FKBP5Q13451 457 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-211ENST00000551634 HSP90AA2PQ14568 343 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-211ENST00000551634 N4BP2Q86UW6 1770 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-211ENST00000551634 NUTM2FA1L443 756 aa28.75■■■□□ 2.19
NPAS3-211ENST00000551634 BABAM1Q9NWV8 329 aa28.75■■■□□ 2.19
NPAS3-211ENST00000551634 TMEM63CQ9P1W3 806 aa28.75■■■□□ 2.19
NPAS3-211ENST00000551634 PXDNLA1KZ92 1463 aa28.74■■■□□ 2.19
NPAS3-211ENST00000551634 PNMA6EA0A0J9YXQ4 647 aa28.74■■■□□ 2.19
NPAS3-211ENST00000551634 RBM27Q9P2N5 1060 aaKnown RBP28.74■■■□□ 2.19
NPAS3-211ENST00000551634 NOL7Q9UMY1 257 aaKnown RBP28.74■■■□□ 2.19
NPAS3-211ENST00000551634 SOX12O15370 315 aa28.73■■■□□ 2.19
NPAS3-211ENST00000551634 CEP170BQ9Y4F5 1589 aaPredicted RBP28.73■■■□□ 2.19
NPAS3-211ENST00000551634 TERF1P54274 439 aa28.73■■■□□ 2.19
NPAS3-211ENST00000551634 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.73■■■□□ 2.19
NPAS3-211ENST00000551634 AMPHP49418 695 aa28.72■■■□□ 2.19
NPAS3-211ENST00000551634 ANO2Q9NQ90 1003 aa28.72■■■□□ 2.19
NPAS3-211ENST00000551634 TSHZ3Q63HK5 1081 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 TRIM6-TRIM34B2RNG4 842 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 PALD1Q9ULE6 856 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 GNAT3A8MTJ3 354 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 GLIPR1L2Q4G1C9 344 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 RILPL2Q969X0 211 aa28.71■■■□□ 2.19
NPAS3-211ENST00000551634 ZNF500O60304 480 aaPredicted RBP28.69■■■□□ 2.18
NPAS3-211ENST00000551634 KIAA1211Q6ZU35 1233 aa28.69■■■□□ 2.18
NPAS3-211ENST00000551634 SYCE3A1L190 88 aa28.68■■■□□ 2.18
NPAS3-211ENST00000551634 MCM5P33992 734 aa28.68■■■□□ 2.18
NPAS3-211ENST00000551634 LRRFIP2Q9Y608 721 aaKnown RBP28.68■■■□□ 2.18
NPAS3-211ENST00000551634 LTKP29376 864 aa28.67■■■□□ 2.18
NPAS3-211ENST00000551634 SYAP1Q96A49 352 aaPredicted RBP28.67■■■□□ 2.18
NPAS3-211ENST00000551634 NSFL1CQ9UNZ2 370 aaKnown RBP28.67■■■□□ 2.18
NPAS3-211ENST00000551634 RAB11FIP3O75154 756 aa28.66■■■□□ 2.18
NPAS3-211ENST00000551634 SSH3Q8TE77 659 aa28.66■■■□□ 2.18
NPAS3-211ENST00000551634 USP44Q9H0E7 712 aa28.66■■■□□ 2.18
NPAS3-211ENST00000551634 UBTFL1P0CB47 393 aaPredicted RBP28.65■■■□□ 2.18
NPAS3-211ENST00000551634 NGDNQ8NEJ9 315 aaKnown RBP28.64■■■□□ 2.18
NPAS3-211ENST00000551634 TAF7Q15545 349 aaPredicted RBP28.64■■■□□ 2.18
NPAS3-211ENST00000551634 CHAMP1Q96JM3 812 aa28.64■■■□□ 2.18
NPAS3-211ENST00000551634 MAP3K5Q99683 1374 aa28.64■■■□□ 2.18
NPAS3-211ENST00000551634 CEBPAP49715 358 aaPredicted RBP28.63■■■□□ 2.17
NPAS3-211ENST00000551634 FOXD4L5Q5VV16 416 aaPredicted RBP28.63■■■□□ 2.17
NPAS3-211ENST00000551634 FOXD4L4Q8WXT5 416 aaPredicted RBP28.63■■■□□ 2.17
NPAS3-211ENST00000551634 HSPA4P34932 840 aa28.63■■■□□ 2.17
NPAS3-211ENST00000551634 PIK3C2AO00443 1686 aa28.63■■■□□ 2.17
NPAS3-211ENST00000551634 ZKSCAN5Q9Y2L8 839 aa28.63■■■□□ 2.17
NPAS3-211ENST00000551634 WDR33Q9C0J8 1336 aaKnown RBP28.62■■■□□ 2.17
NPAS3-211ENST00000551634 UNC5CLQ8IV45 518 aa28.62■■■□□ 2.17
NPAS3-211ENST00000551634 PLEKHG5O94827 1062 aa28.62■■■□□ 2.17
NPAS3-211ENST00000551634 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.62■■■□□ 2.17
NPAS3-211ENST00000551634 CCDC39Q9UFE4 941 aa28.62■■■□□ 2.17
NPAS3-211ENST00000551634 IL17REQ8NFR9 667 aa28.61■■■□□ 2.17
NPAS3-211ENST00000551634 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
NPAS3-211ENST00000551634 PHF14O94880 888 aa28.6■■■□□ 2.17
NPAS3-211ENST00000551634 POLA2Q14181 598 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms