RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	ARX	Q96QS3	562 aa		12.09	□□□□□ -0.47
ATXN2-223	ENST00000551551	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.09	□□□□□ -0.47
ATXN2-223	ENST00000551551	ATP6V1A	P38606	617 aa		12.08	□□□□□ -0.48
ATXN2-223	ENST00000551551	PLCB2	Q00722	1185 aa		12.08	□□□□□ -0.48
ATXN2-223	ENST00000551551	RALBP1	Q15311	655 aa		12.08	□□□□□ -0.48
ATXN2-223	ENST00000551551	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.08	□□□□□ -0.48
ATXN2-223	ENST00000551551	BTAF1	O14981	1849 aa		12.07	□□□□□ -0.48
ATXN2-223	ENST00000551551	ZBTB7A	O95365	584 aa		12.07	□□□□□ -0.48
ATXN2-223	ENST00000551551	POTEH	Q6S545	545 aa		12.07	□□□□□ -0.48
ATXN2-223	ENST00000551551	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.07	□□□□□ -0.48
ATXN2-223	ENST00000551551	MAP3K5	Q99683	1374 aa		12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	HTATSF1	O43719	755 aa	Known RBP	12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	PTGER2	P43116	358 aa		12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	VSIG10	Q8N0Z9	540 aa		12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	NLGN1	Q8N2Q7	840 aa		12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	RTCB	Q9Y3I0	505 aa	Known RBP	12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	PKD1L3	Q7Z443	1732 aa		12.06	□□□□□ -0.48
ATXN2-223	ENST00000551551	RGPD2	P0DJD1	1756 aa		12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	GNAT3	A8MTJ3	354 aa		12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	U2SURP	O15042	1029 aa	Known RBP	12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	TRAPPC3L	Q5T215	181 aa		12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	NFATC2IP	Q8NCF5	419 aa		12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	ATG3	Q9NT62	314 aa		12.05	□□□□□ -0.48
ATXN2-223	ENST00000551551	ZNF827	Q17R98	1081 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	RTF1	Q92541	710 aa	Known RBP	12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	SYT17	Q9BSW7	474 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	SLC52A2	Q9HAB3	445 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	ASAP1	Q9ULH1	1129 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	CD2AP	Q9Y5K6	639 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	PNPLA7	Q6ZV29	1317 aa		12.04	□□□□□ -0.48
ATXN2-223	ENST00000551551	PPP2R1A	P30153	589 aa		12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	TEF	Q10587	303 aa		12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	NPM2	Q86SE8	214 aa	Known RBP	12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	SGIP1	Q9BQI5	828 aa		12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	RBM42	Q9BTD8	480 aa	Known RBP	12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	TAOK2	Q9UL54	1235 aa		12.03	□□□□□ -0.48
ATXN2-223	ENST00000551551	GRIN3B	O60391	1043 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	RPS6KA4	O75676	772 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	STARD3NL	O95772	234 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	HMOX1	P09601	288 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	RFC4	P35249	363 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	COL23A1	Q86Y22	540 aa	Predicted RBP	12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	AEBP1	Q8IUX7	1158 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	TTC5	Q8N0Z6	440 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	CNTNAP4	Q9C0A0	1308 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	LY75	O60449	1722 aa		12.02	□□□□□ -0.49
ATXN2-223	ENST00000551551	DOT1L	Q8TEK3	1739 aa		12.01	□□□□□ -0.49
ATXN2-223	ENST00000551551	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.01	□□□□□ -0.49
ATXN2-223	ENST00000551551	RNMT	O43148	476 aa	Known RBP	12.01	□□□□□ -0.49
ATXN2-223	ENST00000551551	MTHFSD	Q2M296	383 aa	Known RBP	12.01	□□□□□ -0.49
ATXN2-223	ENST00000551551	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.01	□□□□□ -0.49
ATXN2-223	ENST00000551551	SHANK3	Q9BYB0	1731 aa		12	□□□□□ -0.49
ATXN2-223	ENST00000551551	GNPAT	O15228	680 aa		12	□□□□□ -0.49
ATXN2-223	ENST00000551551	ABCB7	O75027	752 aa		12	□□□□□ -0.49
ATXN2-223	ENST00000551551	QSER1	Q2KHR3	1735 aa		12	□□□□□ -0.49
ATXN2-223	ENST00000551551	PNISR	Q8TF01	805 aa	Known RBP	11.99	□□□□□ -0.49
ATXN2-223	ENST00000551551	PAPPA	Q13219	1627 aa		11.99	□□□□□ -0.49
ATXN2-223	ENST00000551551	CASZ1	Q86V15	1759 aa		11.98	□□□□□ -0.49
ATXN2-223	ENST00000551551		A0A087WZG4	1122 aa		11.98	□□□□□ -0.49
ATXN2-223	ENST00000551551	PTCD1	O75127	700 aa	Known RBP	11.98	□□□□□ -0.49
ATXN2-223	ENST00000551551	KCNQ4	P56696	695 aa		11.98	□□□□□ -0.49
ATXN2-223	ENST00000551551	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.98	□□□□□ -0.49
ATXN2-223	ENST00000551551	ZNF831	Q5JPB2	1677 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	ZPR1	O75312	459 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	PRKAR2B	P31323	418 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	GPR162	Q16538	588 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	LINC00116	Q8NCU8	138 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	RSPH6A	Q9H0K4	717 aa		11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.97	□□□□□ -0.49
ATXN2-223	ENST00000551551	ITGB4	P16144	1822 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	TGFB2	P61812	414 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	LMOD3	Q0VAK6	560 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	CNGB1	Q14028	1251 aa	Predicted RBP	11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	ZNF790	Q6PG37	636 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	FMNL2	Q96PY5	1086 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	LGR6	Q9HBX8	967 aa		11.96	□□□□□ -0.49
ATXN2-223	ENST00000551551	KDM6A	O15550	1401 aa	Predicted RBP	11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	MAPK8IP3	Q9UPT6	1336 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	BTBD11	A6QL63	1104 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	RGL2	O15211	777 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	CRKL	P46109	303 aa	Known RBP	11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	ITPK1	Q13572	414 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	ARHGEF1	Q92888	912 aa	Known RBP	11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	CCDC87	Q9NVE4	849 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	BABAM1	Q9NWV8	329 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	PDZRN3	Q9UPQ7	1066 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	PARP3	Q9Y6F1	533 aa		11.95	□□□□□ -0.5
ATXN2-223	ENST00000551551	PHF14	O94880	888 aa		11.94	□□□□□ -0.5
ATXN2-223	ENST00000551551	YY1	P25490	414 aa		11.94	□□□□□ -0.5
ATXN2-223	ENST00000551551	TAF7	Q15545	349 aa	Predicted RBP	11.94	□□□□□ -0.5
ATXN2-223	ENST00000551551	CHMP4A	Q9BY43	222 aa		11.94	□□□□□ -0.5
ATXN2-223	ENST00000551551	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.93	□□□□□ -0.5
ATXN2-223	ENST00000551551	DDX10	Q13206	875 aa	Known RBP	11.93	□□□□□ -0.5
ATXN2-223	ENST00000551551	IL17RE	Q8NFR9	667 aa		11.93	□□□□□ -0.5
ATXN2-223	ENST00000551551	C4B	P0C0L5	1744 aa		11.93	□□□□□ -0.5
ATXN2-223	ENST00000551551	C5	P01031	1676 aa		11.93	□□□□□ -0.5
ATXN2-223	ENST00000551551	CEMIP	Q8WUJ3	1361 aa		11.92	□□□□□ -0.5
ATXN2-223	ENST00000551551	SNRPA1	P09661	255 aa	Known RBP	11.92	□□□□□ -0.5

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