RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 PKP1Q13835 747 aa16■□□□□ 0.15
CACNB3-219ENST00000551544 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
CACNB3-219ENST00000551544 MCTP1Q6DN14 999 aa16■□□□□ 0.15
CACNB3-219ENST00000551544 C14orf37Q86TY3 774 aa16■□□□□ 0.15
CACNB3-219ENST00000551544 HOXC9P31274 260 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 ZGPATQ8N5A5 531 aaKnown RBP15.99■□□□□ 0.15
CACNB3-219ENST00000551544 LRRCC1Q9C099 1032 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 OSBPL3Q9H4L5 887 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 GNAI3P08754 354 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 NUCB2P80303 420 aa15.99■□□□□ 0.15
CACNB3-219ENST00000551544 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
CACNB3-219ENST00000551544 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
CACNB3-219ENST00000551544 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
CACNB3-219ENST00000551544 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
CACNB3-219ENST00000551544 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
CACNB3-219ENST00000551544 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
CACNB3-219ENST00000551544 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
CACNB3-219ENST00000551544 NCLP19338 710 aaKnown RBP15.97■□□□□ 0.15
CACNB3-219ENST00000551544 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
CACNB3-219ENST00000551544 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
CACNB3-219ENST00000551544 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
CACNB3-219ENST00000551544 MX1P20591 662 aa15.96■□□□□ 0.15
CACNB3-219ENST00000551544 ATP8B2P98198 1209 aa15.96■□□□□ 0.15
CACNB3-219ENST00000551544 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
CACNB3-219ENST00000551544 KCNA6P17658 529 aa15.95■□□□□ 0.14
CACNB3-219ENST00000551544 NEK4P51957 841 aa15.95■□□□□ 0.14
CACNB3-219ENST00000551544 TAF7Q15545 349 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-219ENST00000551544 CWC22Q9HCG8 908 aaKnown RBP15.95■□□□□ 0.14
CACNB3-219ENST00000551544 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
CACNB3-219ENST00000551544 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-219ENST00000551544 MAP3K5Q99683 1374 aa15.95■□□□□ 0.14
CACNB3-219ENST00000551544 CYP2E1P05181 493 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-219ENST00000551544 ESYT1Q9BSJ8 1104 aa15.94■□□□□ 0.14
CACNB3-219ENST00000551544 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
CACNB3-219ENST00000551544 SALL3Q9BXA9 1300 aa15.94■□□□□ 0.14
CACNB3-219ENST00000551544 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
CACNB3-219ENST00000551544 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
CACNB3-219ENST00000551544 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 TRIM44Q96DX7 344 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 USP44Q9H0E7 712 aa15.93■□□□□ 0.14
CACNB3-219ENST00000551544 IL1RAPL2Q9NP60 686 aa15.93■□□□□ 0.14
CACNB3-219ENST00000551544 ANO2Q9NQ90 1003 aa15.93■□□□□ 0.14
CACNB3-219ENST00000551544 IBTKQ9P2D0 1353 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 EIF2S2P20042 333 aaKnown RBP15.93■□□□□ 0.14
CACNB3-219ENST00000551544 ZBTB7CA1YPR0 619 aa15.92■□□□□ 0.14
CACNB3-219ENST00000551544 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
CACNB3-219ENST00000551544 NOL8Q76FK4 1167 aaKnown RBP15.92■□□□□ 0.14
CACNB3-219ENST00000551544 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
CACNB3-219ENST00000551544 SLIT1O75093 1534 aa15.92■□□□□ 0.14
CACNB3-219ENST00000551544 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
CACNB3-219ENST00000551544 LMBRD1Q9NUN5 540 aa15.92■□□□□ 0.14
CACNB3-219ENST00000551544 PRPF40AO75400 957 aaKnown RBP15.91■□□□□ 0.14
CACNB3-219ENST00000551544 CHMLP26374 656 aa15.91■□□□□ 0.14
CACNB3-219ENST00000551544 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
CACNB3-219ENST00000551544 NAP1L5Q96NT1 182 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-219ENST00000551544 PALD1Q9ULE6 856 aa15.91■□□□□ 0.14
CACNB3-219ENST00000551544 ZDHHC9Q9Y397 364 aa15.91■□□□□ 0.14
CACNB3-219ENST00000551544 MCCP23508 829 aa15.9■□□□□ 0.14
CACNB3-219ENST00000551544 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
CACNB3-219ENST00000551544 RBM33Q96EV2 1170 aaKnown RBP15.9■□□□□ 0.14
CACNB3-219ENST00000551544 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
CACNB3-219ENST00000551544 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
CACNB3-219ENST00000551544 ESPNB1AK53 854 aa15.9■□□□□ 0.14
CACNB3-219ENST00000551544 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
CACNB3-219ENST00000551544 NWD1Q149M9 1564 aa15.89■□□□□ 0.13
CACNB3-219ENST00000551544 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
CACNB3-219ENST00000551544 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
CACNB3-219ENST00000551544 SURF6O75683 361 aaKnown RBP15.89■□□□□ 0.13
CACNB3-219ENST00000551544 MAP4K4O95819 1239 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-219ENST00000551544 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
CACNB3-219ENST00000551544 SRCIN1Q9C0H9 1055 aa15.89■□□□□ 0.13
CACNB3-219ENST00000551544 STAP2Q9UGK3 403 aa15.89■□□□□ 0.13
CACNB3-219ENST00000551544 LRRC37A3O60309 1634 aa15.88■□□□□ 0.13
CACNB3-219ENST00000551544 ANKARQ7Z5J8 1434 aa15.88■□□□□ 0.13
CACNB3-219ENST00000551544 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
CACNB3-219ENST00000551544 XRN1Q8IZH2 1706 aaKnown RBP15.88■□□□□ 0.13
CACNB3-219ENST00000551544 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-219ENST00000551544 ZSCAN23Q3MJ62 389 aa15.88■□□□□ 0.13
CACNB3-219ENST00000551544 BABAM1Q9NWV8 329 aa15.88■□□□□ 0.13
CACNB3-219ENST00000551544 UPF3BQ9BZI7 483 aaKnown RBP15.87■□□□□ 0.13
CACNB3-219ENST00000551544 RRP9O43818 475 aaKnown RBP15.87■□□□□ 0.13
CACNB3-219ENST00000551544 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
CACNB3-219ENST00000551544 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
CACNB3-219ENST00000551544 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
CACNB3-219ENST00000551544 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
CACNB3-219ENST00000551544 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 ANXA1P04083 346 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 GPT2Q8TD30 523 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 IL25Q9H293 177 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 CHPF2Q9P2E5 772 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 KCNQ3O43525 872 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 NBPF7P0C2Y1 421 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-219ENST00000551544 MCM2P49736 904 aa15.86■□□□□ 0.13
CACNB3-219ENST00000551544 ZNF445P59923 1031 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms