RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 ARID3CA6NKF2 412 aa6.91□□□□□ -1.3
SCAF11-215ENST00000551391 BCRP11274 1271 aa6.91□□□□□ -1.3
SCAF11-215ENST00000551391 POU4F2Q12837 409 aa6.91□□□□□ -1.3
SCAF11-215ENST00000551391 DBN1Q16643 649 aa6.91□□□□□ -1.3
SCAF11-215ENST00000551391 ADAMTS19Q8TE59 1207 aa6.91□□□□□ -1.3
SCAF11-215ENST00000551391 CALR3Q96L12 384 aaKnown RBP6.91□□□□□ -1.3
SCAF11-215ENST00000551391 CYP2U1Q7Z449 544 aa6.9□□□□□ -1.3
SCAF11-215ENST00000551391 GTPBP3Q969Y2 492 aaKnown RBP6.9□□□□□ -1.3
SCAF11-215ENST00000551391 ERVK-9P63128 1117 aa6.89□□□□□ -1.31
SCAF11-215ENST00000551391 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
SCAF11-215ENST00000551391 SERPINA10Q9UK55 444 aa6.89□□□□□ -1.31
SCAF11-215ENST00000551391 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
SCAF11-215ENST00000551391 MX2P20592 715 aa6.88□□□□□ -1.31
SCAF11-215ENST00000551391 NBPF10Q6P3W6 841 aaKnown RBP6.88□□□□□ -1.31
SCAF11-215ENST00000551391 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
SCAF11-215ENST00000551391 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
SCAF11-215ENST00000551391 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
SCAF11-215ENST00000551391 MSTNO14793 375 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 CLN3Q13286 438 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 WDR44Q5JSH3 913 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 TAS1R3Q7RTX0 852 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 NFATC2IPQ8NCF5 419 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
SCAF11-215ENST00000551391 PCDHB11Q9Y5F2 797 aa6.87□□□□□ -1.31
SCAF11-215ENST00000551391 F11P03951 625 aa6.86□□□□□ -1.31
SCAF11-215ENST00000551391 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-215ENST00000551391 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
SCAF11-215ENST00000551391 CCDC97Q96F63 343 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-215ENST00000551391 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
SCAF11-215ENST00000551391 SPATA31C2B4DYI2 1134 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 WASLO00401 505 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-215ENST00000551391 CCDC82Q8N4S0 544 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 ACDQ96AP0 544 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 ARHGEF10LQ9HCE6 1279 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 LRRC4BQ9NT99 713 aa6.85□□□□□ -1.31
SCAF11-215ENST00000551391 MAP2K3P46734 347 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 SCTRP47872 440 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 GALNT6Q8NCL4 622 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 PPP1R12CQ9BZL4 782 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 PHF24Q9UPV7 400 aa6.84□□□□□ -1.31
SCAF11-215ENST00000551391 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-215ENST00000551391 GNRH1P01148 92 aa6.83□□□□□ -1.32
SCAF11-215ENST00000551391 SLFNL1Q499Z3 407 aa6.83□□□□□ -1.32
SCAF11-215ENST00000551391 CFHR5Q9BXR6 569 aa6.83□□□□□ -1.32
SCAF11-215ENST00000551391 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
SCAF11-215ENST00000551391 PALM3A6NDB9 673 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-215ENST00000551391 OIP5O43482 229 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 ATP9BO43861 1147 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 LZTS3O60299 673 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-215ENST00000551391 MAP7D1Q3KQU3 841 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 RNF135Q8IUD6 432 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 CNKSR1Q969H4 720 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 SPOCK3Q9BQ16 436 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 OXCT2Q9BYC2 517 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-215ENST00000551391 GPAMQ9HCL2 828 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 RAB6BQ9NRW1 208 aa6.82□□□□□ -1.32
SCAF11-215ENST00000551391 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 PHKA2P46019 1235 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 CENPCQ03188 943 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 TMEM214Q6NUQ4 689 aaKnown RBP6.81□□□□□ -1.32
SCAF11-215ENST00000551391 TBC1D9Q6ZT07 1266 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 ZSCAN10Q96SZ4 725 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-215ENST00000551391 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
SCAF11-215ENST00000551391 TFIP11Q9UBB9 837 aaKnown RBP6.81□□□□□ -1.32
SCAF11-215ENST00000551391 A0A1B0GTH6 734 aa6.8□□□□□ -1.32
SCAF11-215ENST00000551391 CFAP70Q5T0N1 1121 aa6.8□□□□□ -1.32
SCAF11-215ENST00000551391 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
SCAF11-215ENST00000551391 RRAGCQ9HB90 399 aa6.8□□□□□ -1.32
SCAF11-215ENST00000551391 MKL2Q9ULH7 1088 aa6.8□□□□□ -1.32
SCAF11-215ENST00000551391 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-215ENST00000551391 ADAM23O75077 832 aa6.79□□□□□ -1.32
SCAF11-215ENST00000551391 SKIP12755 728 aa6.79□□□□□ -1.32
SCAF11-215ENST00000551391 PLPP7Q8NBV4 271 aa6.79□□□□□ -1.32
SCAF11-215ENST00000551391 CCDC85AQ96PX6 553 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-215ENST00000551391 GDF2Q9UK05 429 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-215ENST00000551391 SRPK2P78362 688 aaKnown RBP6.78□□□□□ -1.32
SCAF11-215ENST00000551391 ESCO1Q5FWF5 840 aa6.78□□□□□ -1.32
SCAF11-215ENST00000551391 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
SCAF11-215ENST00000551391 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
SCAF11-215ENST00000551391 USP17L5A8MUK1 530 aa6.77□□□□□ -1.33
SCAF11-215ENST00000551391 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-215ENST00000551391 IL2RAP01589 272 aa6.77□□□□□ -1.33
SCAF11-215ENST00000551391 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-215ENST00000551391 LBRQ14739 615 aaKnown RBP6.77□□□□□ -1.33
SCAF11-215ENST00000551391 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
SCAF11-215ENST00000551391 EDARADDQ8WWZ3 215 aa6.77□□□□□ -1.33
SCAF11-215ENST00000551391 ARID3AQ99856 593 aa6.77□□□□□ -1.33
SCAF11-215ENST00000551391 USP17L3A6NCW0 530 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 USP17L4A6NCW7 530 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 PIK3R2O00459 728 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 BMP4P12644 408 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 AMPD1P23109 780 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 SNRPNP63162 240 aaKnown RBP6.76□□□□□ -1.33
SCAF11-215ENST00000551391 USP4Q13107 963 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms