RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 RTL1A6NKG5 1358 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
PTPRR-211ENST00000551219 SDSP20132 328 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 CAVIN1Q6NZI2 390 aaKnown RBP8.17□□□□□ -1.1
PTPRR-211ENST00000551219 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 OSBPL3Q9H4L5 887 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 NOL7Q9UMY1 257 aaKnown RBP8.17□□□□□ -1.1
PTPRR-211ENST00000551219 ELL2O00472 640 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-211ENST00000551219 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 MAP7D2Q96T17 732 aa8.17□□□□□ -1.1
PTPRR-211ENST00000551219 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
PTPRR-211ENST00000551219 FBXW7Q969H0 707 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 DLG5Q8TDM6 1919 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 MSH6P52701 1360 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 A2ML1A8K2U0 1454 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 CHL1O00533 1208 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 NCLP19338 710 aaKnown RBP8.16□□□□□ -1.1
PTPRR-211ENST00000551219 LRSAM1Q6UWE0 723 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 C3P01024 1663 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 SPATA31D1Q6ZQQ2 1576 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
PTPRR-211ENST00000551219 MCCP23508 829 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 NME9Q86XW9 330 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
PTPRR-211ENST00000551219 AKAP12Q02952 1782 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 AGLP35573 1532 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 EPB41L2O43491 1005 aaKnown RBP8.15□□□□□ -1.1
PTPRR-211ENST00000551219 ANAPC15P60006 121 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 SYAP1Q96A49 352 aaPredicted RBP8.15□□□□□ -1.1
PTPRR-211ENST00000551219 RBSNQ9H1K0 784 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 CCDC39Q9UFE4 941 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 TECPR2O15040 1411 aa8.15□□□□□ -1.1
PTPRR-211ENST00000551219 CCT4P50991 539 aaKnown RBP8.15□□□□□ -1.11
PTPRR-211ENST00000551219 IL17RAQ96F46 866 aa8.15□□□□□ -1.11
PTPRR-211ENST00000551219 ITSN1Q15811 1721 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 RIOK3O14730 519 aaKnown RBP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 C16orf71Q8IYS4 520 aaPredicted RBP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 GPT2Q8TD30 523 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 INTS4Q96HW7 963 aaKnown RBP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 ZKSCAN5Q9Y2L8 839 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 CPS1P31327 1500 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 PHF14O94880 888 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 CUL4AQ13619 759 aa8.14□□□□□ -1.11
PTPRR-211ENST00000551219 MTERF4Q7Z6M4 381 aaKnown RBP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTPRR-211ENST00000551219 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 ZDHHC9Q9Y397 364 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 PLEKHG3A1L390 1219 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 FAM83GA6ND36 823 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 FBLN1P23142 703 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 WAPLQ7Z5K2 1190 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 ZGPATQ8N5A5 531 aaKnown RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 OTUD7AQ8TE49 926 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 NUDT16Q96DE0 195 aaKnown RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-211ENST00000551219 BRD1O95696 1058 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 PDE1AP54750 535 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 PKP1Q13835 747 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 MEIS3Q99687 375 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 CRB1P82279 1406 aa8.13□□□□□ -1.11
PTPRR-211ENST00000551219 AOX1Q06278 1338 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 PDE4DQ08499 809 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 KRI1Q8N9T8 703 aaKnown RBP8.12□□□□□ -1.11
PTPRR-211ENST00000551219 SRCIN1Q9C0H9 1055 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 NRXN3Q9Y4C0 1643 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 RGPD1P0DJD0 1748 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 DCTN1Q14203 1278 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-211ENST00000551219 TMX3Q96JJ7 454 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 TMEM63CQ9P1W3 806 aa8.12□□□□□ -1.11
PTPRR-211ENST00000551219 SOS1Q07889 1333 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-211ENST00000551219 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
PTPRR-211ENST00000551219 GNAI2P04899 355 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 BRD2P25440 801 aaKnown RBP8.11□□□□□ -1.11
PTPRR-211ENST00000551219 EIF4A2Q14240 407 aaKnown RBP8.11□□□□□ -1.11
PTPRR-211ENST00000551219 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
PTPRR-211ENST00000551219 FAM184AQ8NB25 1140 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 TSPY26PQ9H489 355 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 SALL3Q9BXA9 1300 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 OVOS2A0A0J9YW53 1432 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 OVOS2Q6IE36 1432 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 NEK4P51957 841 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 SULT6B1Q6IMI4 303 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 PKNOX2Q96KN3 472 aa8.11□□□□□ -1.11
PTPRR-211ENST00000551219 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms