RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 USP17L4A6NCW7 530 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 USP17L2Q6R6M4 530 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 USP17L1Q7RTZ2 530 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 TRIM50Q86XT4 487 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 VWA5B2Q8N398 1253 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
GPN3-209ENST00000551079 TIMMDC1Q9NPL8 285 aa9.91□□□□□ -0.82
GPN3-209ENST00000551079 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
GPN3-209ENST00000551079 TMEM229AB2RXF0 380 aa9.89□□□□□ -0.83
GPN3-209ENST00000551079 PSME1Q06323 249 aa9.89□□□□□ -0.83
GPN3-209ENST00000551079 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
GPN3-209ENST00000551079 PPARGC1BQ86YN6 1023 aaKnown RBP9.89□□□□□ -0.83
GPN3-209ENST00000551079 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
GPN3-209ENST00000551079 RHBDD1Q8TEB9 315 aa9.89□□□□□ -0.83
GPN3-209ENST00000551079 H7C1W4 665 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 ATP1A2P50993 1020 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 SMTNP53814 917 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
GPN3-209ENST00000551079 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
GPN3-209ENST00000551079 BACH1O14867 736 aa9.87□□□□□ -0.83
GPN3-209ENST00000551079 F11P03951 625 aa9.87□□□□□ -0.83
GPN3-209ENST00000551079 PHKA2P46019 1235 aa9.87□□□□□ -0.83
GPN3-209ENST00000551079 C4orf17Q53FE4 359 aa9.87□□□□□ -0.83
GPN3-209ENST00000551079 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
GPN3-209ENST00000551079 TFIP11Q9UBB9 837 aaKnown RBP9.87□□□□□ -0.83
GPN3-209ENST00000551079 A6NJY4 79 aa9.85□□□□□ -0.83
GPN3-209ENST00000551079 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
GPN3-209ENST00000551079 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
GPN3-209ENST00000551079 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
GPN3-209ENST00000551079 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
GPN3-209ENST00000551079 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
GPN3-209ENST00000551079 MTFR1Q15390 333 aa9.84□□□□□ -0.83
GPN3-209ENST00000551079 DBN1Q16643 649 aa9.84□□□□□ -0.83
GPN3-209ENST00000551079 ZSCAN1Q8NBB4 408 aa9.84□□□□□ -0.83
GPN3-209ENST00000551079 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
GPN3-209ENST00000551079 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
GPN3-209ENST00000551079 NIFKQ9BYG3 293 aaKnown RBP9.84□□□□□ -0.83
GPN3-209ENST00000551079 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
GPN3-209ENST00000551079 MAFBQ9Y5Q3 323 aaPredicted RBP9.84□□□□□ -0.83
GPN3-209ENST00000551079 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 DNAAF2Q9NVR5 837 aaKnown RBP9.83□□□□□ -0.84
GPN3-209ENST00000551079 ZNF358Q9NW07 568 aa9.83□□□□□ -0.84
GPN3-209ENST00000551079 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
GPN3-209ENST00000551079 CLDN10P78369 228 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 KRT76Q01546 638 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 CCDC102BQ68D86 513 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 OGFOD1Q8N543 542 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 TPCN2Q8NHX9 752 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 GPAMQ9HCL2 828 aa9.82□□□□□ -0.84
GPN3-209ENST00000551079 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
GPN3-209ENST00000551079 ZBTB7BO15156 539 aaPredicted RBP9.81□□□□□ -0.84
GPN3-209ENST00000551079 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
GPN3-209ENST00000551079 PLA2G4AP47712 749 aa9.81□□□□□ -0.84
GPN3-209ENST00000551079 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
GPN3-209ENST00000551079 NUCKS1Q9H1E3 243 aaKnown RBP9.81□□□□□ -0.84
GPN3-209ENST00000551079 RBM19Q9Y4C8 960 aaKnown RBP9.81□□□□□ -0.84
GPN3-209ENST00000551079 MSX1P28360 303 aa9.8□□□□□ -0.84
GPN3-209ENST00000551079 LBRQ14739 615 aaKnown RBP9.8□□□□□ -0.84
GPN3-209ENST00000551079 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
GPN3-209ENST00000551079 TRERF1Q96PN7 1200 aa9.8□□□□□ -0.84
GPN3-209ENST00000551079 ZMYND15Q9H091 742 aa9.8□□□□□ -0.84
GPN3-209ENST00000551079 IQSEC3Q9UPP2 1182 aaPredicted RBP9.8□□□□□ -0.84
GPN3-209ENST00000551079 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
GPN3-209ENST00000551079 LORP23490 312 aaPredicted RBP9.79□□□□□ -0.84
GPN3-209ENST00000551079 SIX5Q8N196 739 aa9.79□□□□□ -0.84
GPN3-209ENST00000551079 C1orf216Q8TAB5 229 aa9.79□□□□□ -0.84
GPN3-209ENST00000551079 GTPBP3Q969Y2 492 aaKnown RBP9.79□□□□□ -0.84
GPN3-209ENST00000551079 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
GPN3-209ENST00000551079 SCHIP1Q9P0W5 487 aaPredicted RBP9.79□□□□□ -0.84
GPN3-209ENST00000551079 RASA1P20936 1047 aa9.78□□□□□ -0.84
GPN3-209ENST00000551079 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
GPN3-209ENST00000551079 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
GPN3-209ENST00000551079 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
GPN3-209ENST00000551079 ZNF594Q96JF6 807 aaPredicted RBP9.78□□□□□ -0.84
GPN3-209ENST00000551079 M0R2N6 131 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 GPR25O00155 361 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 EPHA4P54764 986 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 EFHC2Q5JST6 749 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 LARP1Q6PKG0 1096 aaKnown RBP9.77□□□□□ -0.85
GPN3-209ENST00000551079 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 CRISPLD1Q9H336 500 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 RUBCNLQ9H714 662 aa9.77□□□□□ -0.85
GPN3-209ENST00000551079 GAS6Q14393 721 aa9.76□□□□□ -0.85
GPN3-209ENST00000551079 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
GPN3-209ENST00000551079 USP3Q9Y6I4 520 aa9.76□□□□□ -0.85
GPN3-209ENST00000551079 FOXK2Q01167 660 aa9.75□□□□□ -0.85
GPN3-209ENST00000551079 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
GPN3-209ENST00000551079 KANK4Q5T7N3 995 aaPredicted RBP9.75□□□□□ -0.85
GPN3-209ENST00000551079 VRTNQ9H8Y1 702 aa9.75□□□□□ -0.85
GPN3-209ENST00000551079 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
GPN3-209ENST00000551079 ZDHHC3Q9NYG2 299 aa9.75□□□□□ -0.85
GPN3-209ENST00000551079 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
GPN3-209ENST00000551079 TATP17735 454 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms