RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
PRPF40B-211ENST00000551063 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
PRPF40B-211ENST00000551063 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
PRPF40B-211ENST00000551063 KCNQ4P56696 695 aa20.55■□□□□ 0.88
PRPF40B-211ENST00000551063 SIK1P57059 783 aa20.55■□□□□ 0.88
PRPF40B-211ENST00000551063 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
PRPF40B-211ENST00000551063 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
PRPF40B-211ENST00000551063 ADAMTS7Q9UKP4 1686 aa20.54■□□□□ 0.88
PRPF40B-211ENST00000551063 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
PRPF40B-211ENST00000551063 YY1P25490 414 aa20.53■□□□□ 0.88
PRPF40B-211ENST00000551063 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
PRPF40B-211ENST00000551063 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
PRPF40B-211ENST00000551063 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
PRPF40B-211ENST00000551063 NEFMP07197 916 aa20.5■□□□□ 0.87
PRPF40B-211ENST00000551063 SGIP1Q9BQI5 828 aa20.5■□□□□ 0.87
PRPF40B-211ENST00000551063 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-211ENST00000551063 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
PRPF40B-211ENST00000551063 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
PRPF40B-211ENST00000551063 C5P01031 1676 aa20.49■□□□□ 0.87
PRPF40B-211ENST00000551063 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
PRPF40B-211ENST00000551063 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
PRPF40B-211ENST00000551063 SYT17Q9BSW7 474 aa20.49■□□□□ 0.87
PRPF40B-211ENST00000551063 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
PRPF40B-211ENST00000551063 ITPK1Q13572 414 aa20.48■□□□□ 0.87
PRPF40B-211ENST00000551063 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
PRPF40B-211ENST00000551063 ARXQ96QS3 562 aa20.48■□□□□ 0.87
PRPF40B-211ENST00000551063 FHDC1Q9C0D6 1143 aaPredicted RBP20.48■□□□□ 0.87
PRPF40B-211ENST00000551063 LINC00116Q8NCU8 138 aa20.47■□□□□ 0.87
PRPF40B-211ENST00000551063 AK7Q96M32 723 aa20.47■□□□□ 0.87
PRPF40B-211ENST00000551063 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
PRPF40B-211ENST00000551063 RBM42Q9BTD8 480 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-211ENST00000551063 QSER1Q2KHR3 1735 aa20.47■□□□□ 0.87
PRPF40B-211ENST00000551063 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 HTATSF1O43719 755 aaKnown RBP20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 TEFQ10587 303 aa20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 FLAD1Q8NFF5 587 aa20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 C4BP0C0L5 1744 aa20.46■□□□□ 0.87
PRPF40B-211ENST00000551063 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
PRPF40B-211ENST00000551063 MAPK8IP3Q9UPT6 1336 aa20.45■□□□□ 0.86
PRPF40B-211ENST00000551063 TAF1LQ8IZX4 1826 aa20.44■□□□□ 0.86
PRPF40B-211ENST00000551063 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
PRPF40B-211ENST00000551063 POLD1P28340 1107 aa20.43■□□□□ 0.86
PRPF40B-211ENST00000551063 CNTNAP4Q9C0A0 1308 aa20.43■□□□□ 0.86
PRPF40B-211ENST00000551063 SSFA2P28290 1259 aa20.42■□□□□ 0.86
PRPF40B-211ENST00000551063 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
PRPF40B-211ENST00000551063 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
PRPF40B-211ENST00000551063 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-211ENST00000551063 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
PRPF40B-211ENST00000551063 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-211ENST00000551063 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
PRPF40B-211ENST00000551063 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
PRPF40B-211ENST00000551063 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
PRPF40B-211ENST00000551063 TUBGCP6Q96RT7 1819 aa20.4■□□□□ 0.86
PRPF40B-211ENST00000551063 GNPATO15228 680 aa20.39■□□□□ 0.85
PRPF40B-211ENST00000551063 ANP32CO43423 234 aa20.39■□□□□ 0.85
PRPF40B-211ENST00000551063 MCM10Q7L590 875 aa20.39■□□□□ 0.85
PRPF40B-211ENST00000551063 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.85
PRPF40B-211ENST00000551063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-211ENST00000551063 ZNF790Q6PG37 636 aa20.38■□□□□ 0.85
PRPF40B-211ENST00000551063 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
PRPF40B-211ENST00000551063 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
PRPF40B-211ENST00000551063 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 MSH5O43196 834 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 PHF14O94880 888 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 ADRA2BP18089 450 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 RTCBQ9Y3I0 505 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 TJP1Q07157 1748 aa20.36■□□□□ 0.85
PRPF40B-211ENST00000551063 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 RUNDC1Q96C34 613 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 UBR2Q8IWV8 1755 aa20.35■□□□□ 0.85
PRPF40B-211ENST00000551063 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
PRPF40B-211ENST00000551063 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
PRPF40B-211ENST00000551063 KLHL34Q8N239 644 aa20.34■□□□□ 0.85
PRPF40B-211ENST00000551063 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
PRPF40B-211ENST00000551063 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
PRPF40B-211ENST00000551063 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-211ENST00000551063 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 GPR162Q16538 588 aa20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 CCDC87Q9NVE4 849 aa20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 COL24A1Q17RW2 1714 aa20.32■□□□□ 0.84
PRPF40B-211ENST00000551063 RIPK4P57078 832 aa20.31■□□□□ 0.84
PRPF40B-211ENST00000551063 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-211ENST00000551063 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
PRPF40B-211ENST00000551063 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
PRPF40B-211ENST00000551063 KCNQ3O43525 872 aa20.29■□□□□ 0.84
PRPF40B-211ENST00000551063 STARD3NLO95772 234 aa20.29■□□□□ 0.84
PRPF40B-211ENST00000551063 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-211ENST00000551063 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms