RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
CEP290-205ENST00000550962 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
CEP290-205ENST00000550962 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
CEP290-205ENST00000550962 FCHSD2O94868 740 aa17.76■□□□□ 0.43
CEP290-205ENST00000550962 POLD1P28340 1107 aa17.76■□□□□ 0.43
CEP290-205ENST00000550962 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
CEP290-205ENST00000550962 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
CEP290-205ENST00000550962 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
CEP290-205ENST00000550962 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
CEP290-205ENST00000550962 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
CEP290-205ENST00000550962 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
CEP290-205ENST00000550962 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
CEP290-205ENST00000550962 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
CEP290-205ENST00000550962 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
CEP290-205ENST00000550962 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
CEP290-205ENST00000550962 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
CEP290-205ENST00000550962 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
CEP290-205ENST00000550962 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
CEP290-205ENST00000550962 C4BP0C0L5 1744 aa17.74■□□□□ 0.43
CEP290-205ENST00000550962 SCN11AQ9UI33 1791 aa17.74■□□□□ 0.43
CEP290-205ENST00000550962 TEFQ10587 303 aa17.73■□□□□ 0.43
CEP290-205ENST00000550962 MRC1P22897 1456 aa17.73■□□□□ 0.43
CEP290-205ENST00000550962 TAF1LQ8IZX4 1826 aa17.72■□□□□ 0.43
CEP290-205ENST00000550962 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
CEP290-205ENST00000550962 SSFA2P28290 1259 aa17.72■□□□□ 0.43
CEP290-205ENST00000550962 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
CEP290-205ENST00000550962 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
CEP290-205ENST00000550962 PTCD1O75127 700 aaKnown RBP17.7■□□□□ 0.42
CEP290-205ENST00000550962 PTGER2P43116 358 aa17.7■□□□□ 0.42
CEP290-205ENST00000550962 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
CEP290-205ENST00000550962 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
CEP290-205ENST00000550962 ARXQ96QS3 562 aa17.7■□□□□ 0.42
CEP290-205ENST00000550962 LGR6Q9HBX8 967 aa17.7■□□□□ 0.42
CEP290-205ENST00000550962 GNPATO15228 680 aa17.69■□□□□ 0.42
CEP290-205ENST00000550962 ITPK1Q13572 414 aa17.69■□□□□ 0.42
CEP290-205ENST00000550962 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
CEP290-205ENST00000550962 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
CEP290-205ENST00000550962 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
CEP290-205ENST00000550962 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
CEP290-205ENST00000550962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
CEP290-205ENST00000550962 PHF14O94880 888 aa17.68■□□□□ 0.42
CEP290-205ENST00000550962 RC3H1Q5TC82 1133 aaKnown RBP17.68■□□□□ 0.42
CEP290-205ENST00000550962 CNTNAP4Q9C0A0 1308 aa17.68■□□□□ 0.42
CEP290-205ENST00000550962 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
CEP290-205ENST00000550962 ADRA2BP18089 450 aa17.67■□□□□ 0.42
CEP290-205ENST00000550962 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
CEP290-205ENST00000550962 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
CEP290-205ENST00000550962 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
CEP290-205ENST00000550962 TRAPPC3LQ5T215 181 aa17.65■□□□□ 0.42
CEP290-205ENST00000550962 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
CEP290-205ENST00000550962 UBR3Q6ZT12 1888 aa17.64■□□□□ 0.41
CEP290-205ENST00000550962 CICQ96RK0 1608 aaPredicted RBP17.64■□□□□ 0.41
CEP290-205ENST00000550962 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
CEP290-205ENST00000550962 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
CEP290-205ENST00000550962 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
CEP290-205ENST00000550962 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
CEP290-205ENST00000550962 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
CEP290-205ENST00000550962 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
CEP290-205ENST00000550962 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
CEP290-205ENST00000550962 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
CEP290-205ENST00000550962 RPS6KA4O75676 772 aa17.62■□□□□ 0.41
CEP290-205ENST00000550962 RFC4P35249 363 aa17.62■□□□□ 0.41
CEP290-205ENST00000550962 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
CEP290-205ENST00000550962 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
CEP290-205ENST00000550962 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
CEP290-205ENST00000550962 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
CEP290-205ENST00000550962 BTBD11A6QL63 1104 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 STARD3NLO95772 234 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
CEP290-205ENST00000550962 MSL1Q68DK7 614 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 SYT17Q9BSW7 474 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
CEP290-205ENST00000550962 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
CEP290-205ENST00000550962 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
CEP290-205ENST00000550962 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
CEP290-205ENST00000550962 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
CEP290-205ENST00000550962 DNAJC10Q8IXB1 793 aa17.59■□□□□ 0.41
CEP290-205ENST00000550962 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
CEP290-205ENST00000550962 TJP1Q07157 1748 aa17.58■□□□□ 0.41
CEP290-205ENST00000550962 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
CEP290-205ENST00000550962 MCM10Q7L590 875 aa17.58■□□□□ 0.4
CEP290-205ENST00000550962 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
CEP290-205ENST00000550962 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
CEP290-205ENST00000550962 PLEKHF1Q96S99 279 aa17.58■□□□□ 0.4
CEP290-205ENST00000550962 HEG1Q9ULI3 1381 aa17.57■□□□□ 0.4
CEP290-205ENST00000550962 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
CEP290-205ENST00000550962 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
CEP290-205ENST00000550962 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
CEP290-205ENST00000550962 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
CEP290-205ENST00000550962 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
CEP290-205ENST00000550962 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
CEP290-205ENST00000550962 ZPR1O75312 459 aa17.55■□□□□ 0.4
CEP290-205ENST00000550962 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
CEP290-205ENST00000550962 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
CEP290-205ENST00000550962 A0A087WZG4 1122 aa17.54■□□□□ 0.4
CEP290-205ENST00000550962 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
CEP290-205ENST00000550962 ANP32CO43423 234 aa17.53■□□□□ 0.4
CEP290-205ENST00000550962 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
CEP290-205ENST00000550962 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms