RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
LGR5-206ENST00000550851 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
LGR5-206ENST00000550851 GCC2Q8IWJ2 1684 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 HIP1O00291 1037 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 EXOC5O00471 708 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
LGR5-206ENST00000550851 IDH1O75874 414 aaKnown RBP13.98□□□□□ -0.17
LGR5-206ENST00000550851 MRPL50Q8N5N7 158 aaKnown RBP13.98□□□□□ -0.17
LGR5-206ENST00000550851 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
LGR5-206ENST00000550851 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
LGR5-206ENST00000550851 LARP6Q9BRS8 491 aaKnown RBP13.98□□□□□ -0.17
LGR5-206ENST00000550851 MSH6P52701 1360 aa13.98□□□□□ -0.17
LGR5-206ENST00000550851 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
LGR5-206ENST00000550851 GLRX3O76003 335 aaKnown RBP13.97□□□□□ -0.17
LGR5-206ENST00000550851 TPM4P67936 248 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
LGR5-206ENST00000550851 HOXC9P31274 260 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 ARHGEF5Q12774 1597 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 MYO5CQ9NQX4 1742 aa13.97□□□□□ -0.17
LGR5-206ENST00000550851 IL13P35225 146 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 CHD1O14646 1710 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 MCM2P49736 904 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 ABCF2Q9UG63 623 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
LGR5-206ENST00000550851 XAGE3Q8WTP9 111 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
LGR5-206ENST00000550851 NEO1Q92859 1461 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
LGR5-206ENST00000550851 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
LGR5-206ENST00000550851 G2E3Q7L622 706 aa13.95□□□□□ -0.18
LGR5-206ENST00000550851 TMEM2Q9UHN6 1383 aa13.94□□□□□ -0.18
LGR5-206ENST00000550851 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
LGR5-206ENST00000550851 SNRKQ9NRH2 765 aa13.94□□□□□ -0.18
LGR5-206ENST00000550851 PLA2R1Q13018 1463 aa13.94□□□□□ -0.18
LGR5-206ENST00000550851 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
LGR5-206ENST00000550851 CASTP20810 708 aaKnown RBP13.94□□□□□ -0.18
LGR5-206ENST00000550851 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
LGR5-206ENST00000550851 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 SAFBQ15424 915 aaKnown RBP eCLIP13.93□□□□□ -0.18
LGR5-206ENST00000550851 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
LGR5-206ENST00000550851 NPC1L1Q9UHC9 1359 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 HDAC1Q13547 482 aaPredicted RBP13.93□□□□□ -0.18
LGR5-206ENST00000550851 CWF19L2Q2TBE0 894 aaKnown RBP13.93□□□□□ -0.18
LGR5-206ENST00000550851 BMP2KLQ5H9B9 411 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
LGR5-206ENST00000550851 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
LGR5-206ENST00000550851 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
LGR5-206ENST00000550851 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 METP08581 1390 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 LARP1BQ659C4 914 aaKnown RBP13.92□□□□□ -0.18
LGR5-206ENST00000550851 IP6K1Q92551 441 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 DDX11Q96FC9 970 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 PDRG1Q9NUG6 133 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
LGR5-206ENST00000550851 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
LGR5-206ENST00000550851 MCM4P33991 863 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 NUCB1Q02818 461 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
LGR5-206ENST00000550851 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 PDCP20941 246 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
LGR5-206ENST00000550851 SART3Q15020 963 aaKnown RBP13.91□□□□□ -0.18
LGR5-206ENST00000550851 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 ECHDC1Q9NTX5 307 aa13.91□□□□□ -0.18
LGR5-206ENST00000550851 MPNDQ8N594 471 aa13.9□□□□□ -0.18
LGR5-206ENST00000550851 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
LGR5-206ENST00000550851 RAI14Q9P0K7 980 aa13.9□□□□□ -0.18
LGR5-206ENST00000550851 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
LGR5-206ENST00000550851 SDSP20132 328 aa13.9□□□□□ -0.18
LGR5-206ENST00000550851 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
LGR5-206ENST00000550851 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
LGR5-206ENST00000550851 LDHAL6AQ6ZMR3 332 aa13.9□□□□□ -0.19
LGR5-206ENST00000550851 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
LGR5-206ENST00000550851 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
LGR5-206ENST00000550851 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 CCDC83Q8IWF9 413 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 SEC24BO95487 1268 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
LGR5-206ENST00000550851 NUP133Q8WUM0 1156 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms