RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 AMPHP49418 695 aa9.54□□□□□ -0.88
CBX5-204ENST00000550411 MIER1Q8N108 512 aa9.54□□□□□ -0.88
CBX5-204ENST00000550411 ZNF831Q5JPB2 1677 aa9.54□□□□□ -0.88
CBX5-204ENST00000550411 NSD2O96028 1365 aa9.53□□□□□ -0.88
CBX5-204ENST00000550411 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
CBX5-204ENST00000550411 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
CBX5-204ENST00000550411 GPR162Q16538 588 aa9.53□□□□□ -0.88
CBX5-204ENST00000550411 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
CBX5-204ENST00000550411 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
CBX5-204ENST00000550411 CACNA1SQ13698 1873 aa9.53□□□□□ -0.88
CBX5-204ENST00000550411 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
CBX5-204ENST00000550411 KCNQ4P56696 695 aa9.52□□□□□ -0.89
CBX5-204ENST00000550411 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
CBX5-204ENST00000550411 TFCP2L1Q9NZI6 479 aa9.52□□□□□ -0.89
CBX5-204ENST00000550411 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
CBX5-204ENST00000550411 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
CBX5-204ENST00000550411 CCNL1Q9UK58 526 aaPredicted RBP9.51□□□□□ -0.89
CBX5-204ENST00000550411 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
CBX5-204ENST00000550411 INSRP06213 1382 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 FLT4P35916 1363 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 KIF24Q5T7B8 1368 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
CBX5-204ENST00000550411 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 POLR3GLQ9BT43 218 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 CGNL1Q0VF96 1302 aa9.5□□□□□ -0.89
CBX5-204ENST00000550411 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
CBX5-204ENST00000550411 TATP17735 454 aaPredicted RBP9.49□□□□□ -0.89
CBX5-204ENST00000550411 C1QTNF8P60827 252 aa9.49□□□□□ -0.89
CBX5-204ENST00000550411 USHBP1Q8N6Y0 703 aa9.49□□□□□ -0.89
CBX5-204ENST00000550411 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
CBX5-204ENST00000550411 PANK3Q9H999 370 aa9.49□□□□□ -0.89
CBX5-204ENST00000550411 DICER1Q9UPY3 1922 aaKnown RBP9.48□□□□□ -0.89
CBX5-204ENST00000550411 HSP90AB2PQ58FF8 381 aa9.48□□□□□ -0.89
CBX5-204ENST00000550411 COL23A1Q86Y22 540 aaPredicted RBP9.48□□□□□ -0.89
CBX5-204ENST00000550411 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CBX5-204ENST00000550411 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
CBX5-204ENST00000550411 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
CBX5-204ENST00000550411 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
CBX5-204ENST00000550411 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
CBX5-204ENST00000550411 WASHC2AQ641Q2 1341 aa9.47□□□□□ -0.89
CBX5-204ENST00000550411 DLEC1Q9Y238 1755 aa9.47□□□□□ -0.89
CBX5-204ENST00000550411 TJP1Q07157 1748 aa9.46□□□□□ -0.89
CBX5-204ENST00000550411 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
CBX5-204ENST00000550411 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
CBX5-204ENST00000550411 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
CBX5-204ENST00000550411 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
CBX5-204ENST00000550411 PALLDQ8WX93 1383 aa9.46□□□□□ -0.9
CBX5-204ENST00000550411 MSL1Q68DK7 614 aa9.45□□□□□ -0.9
CBX5-204ENST00000550411 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
CBX5-204ENST00000550411 FLAD1Q8NFF5 587 aa9.45□□□□□ -0.9
CBX5-204ENST00000550411 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
CBX5-204ENST00000550411 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
CBX5-204ENST00000550411 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
CBX5-204ENST00000550411 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
CBX5-204ENST00000550411 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
CBX5-204ENST00000550411 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
CBX5-204ENST00000550411 CYP27B1O15528 508 aa9.43□□□□□ -0.9
CBX5-204ENST00000550411 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
CBX5-204ENST00000550411 SMARCC1Q92922 1105 aaPredicted RBP9.43□□□□□ -0.9
CBX5-204ENST00000550411 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
CBX5-204ENST00000550411 EIF4A2Q14240 407 aaKnown RBP9.42□□□□□ -0.9
CBX5-204ENST00000550411 AK7Q96M32 723 aa9.42□□□□□ -0.9
CBX5-204ENST00000550411 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
CBX5-204ENST00000550411 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
CBX5-204ENST00000550411 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
CBX5-204ENST00000550411 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
CBX5-204ENST00000550411 EYA1Q99502 592 aa9.41□□□□□ -0.9
CBX5-204ENST00000550411 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
CBX5-204ENST00000550411 SIPA1L3O60292 1781 aaPredicted RBP9.41□□□□□ -0.9
CBX5-204ENST00000550411 UBR2Q8IWV8 1755 aa9.41□□□□□ -0.9
CBX5-204ENST00000550411 TIAM2Q8IVF5 1701 aa9.4□□□□□ -0.9
CBX5-204ENST00000550411 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
CBX5-204ENST00000550411 PPM1GO15355 546 aaPredicted RBP9.4□□□□□ -0.9
CBX5-204ENST00000550411 PHF14O94880 888 aa9.4□□□□□ -0.9
CBX5-204ENST00000550411 NBR1Q14596 966 aa9.4□□□□□ -0.9
CBX5-204ENST00000550411 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
CBX5-204ENST00000550411 PIGBQ92521 554 aa9.4□□□□□ -0.9
CBX5-204ENST00000550411 ADCY9O60503 1353 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 SSFA2P28290 1259 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 MORC1Q86VD1 984 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 AMIGO3Q86WK7 504 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 KNSTRNQ9Y448 316 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 CEP350Q5VT06 3117 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 DLG5Q8TDM6 1919 aa9.39□□□□□ -0.91
CBX5-204ENST00000550411 KDRP35968 1356 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 ARFGEF2Q9Y6D5 1785 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.38□□□□□ -0.91
CBX5-204ENST00000550411 LOC102724428A0A0B4J2F2 783 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 SIK1P57059 783 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 SMIM5Q71RC9 77 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 IFNL2Q8IZJ0 200 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
CBX5-204ENST00000550411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■□□□ 14.2
CBX5-204ENST00000550411 TMOD3Q9NYL9 352 aa9.38□□□□□ -0.91
CBX5-204ENST00000550411 NRXN2Q9P2S2 1712 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms