RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
CACNB3-215ENST00000550190 CEMIPQ8WUJ3 1361 aa11.74□□□□□ -0.53
CACNB3-215ENST00000550190 TRIM37O94972 964 aa11.73□□□□□ -0.53
CACNB3-215ENST00000550190 GNAI1P63096 354 aa11.73□□□□□ -0.53
CACNB3-215ENST00000550190 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
CACNB3-215ENST00000550190 ZBED9Q6R2W3 1325 aa11.73□□□□□ -0.53
CACNB3-215ENST00000550190 NHSQ6T4R5 1651 aa11.73□□□□□ -0.53
CACNB3-215ENST00000550190 BTAF1O14981 1849 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 PTF1AQ7RTS3 328 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 PIGBQ92521 554 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
CACNB3-215ENST00000550190 MRC1P22897 1456 aa11.71□□□□□ -0.53
CACNB3-215ENST00000550190 TTC5Q8N0Z6 440 aa11.71□□□□□ -0.53
CACNB3-215ENST00000550190 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
CACNB3-215ENST00000550190 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-215ENST00000550190 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
CACNB3-215ENST00000550190 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.54
CACNB3-215ENST00000550190 BCL9O00512 1426 aa11.7□□□□□ -0.54
CACNB3-215ENST00000550190 IL16Q14005 1332 aa11.7□□□□□ -0.54
CACNB3-215ENST00000550190 KCNQ3O43525 872 aa11.7□□□□□ -0.54
CACNB3-215ENST00000550190 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
CACNB3-215ENST00000550190 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
CACNB3-215ENST00000550190 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
CACNB3-215ENST00000550190 E9PSI1 815 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 CHL1O00533 1208 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 SLFN5Q08AF3 891 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
CACNB3-215ENST00000550190 MBIPQ9NS73 344 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 ATG3Q9NT62 314 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
CACNB3-215ENST00000550190 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
CACNB3-215ENST00000550190 APBA3O96018 575 aa11.68□□□□□ -0.54
CACNB3-215ENST00000550190 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
CACNB3-215ENST00000550190 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
CACNB3-215ENST00000550190 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
CACNB3-215ENST00000550190 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
CACNB3-215ENST00000550190 FANCIQ9NVI1 1328 aa11.67□□□□□ -0.54
CACNB3-215ENST00000550190 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
CACNB3-215ENST00000550190 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
CACNB3-215ENST00000550190 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-215ENST00000550190 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
CACNB3-215ENST00000550190 ELL2O00472 640 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-215ENST00000550190 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
CACNB3-215ENST00000550190 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
CACNB3-215ENST00000550190 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
CACNB3-215ENST00000550190 UBR2Q8IWV8 1755 aa11.66□□□□□ -0.54
CACNB3-215ENST00000550190 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
CACNB3-215ENST00000550190 EIF4A1P60842 406 aaKnown RBP11.65□□□□□ -0.54
CACNB3-215ENST00000550190 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
CACNB3-215ENST00000550190 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-215ENST00000550190 LY75O60449 1722 aa11.65□□□□□ -0.54
CACNB3-215ENST00000550190 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
CACNB3-215ENST00000550190 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
CACNB3-215ENST00000550190 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
CACNB3-215ENST00000550190 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
CACNB3-215ENST00000550190 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
CACNB3-215ENST00000550190 C5P01031 1676 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 LOC102724428A0A0B4J2F2 783 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
CACNB3-215ENST00000550190 KCNQ4P56696 695 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 SIK1P57059 783 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
CACNB3-215ENST00000550190 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
CACNB3-215ENST00000550190 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
CACNB3-215ENST00000550190 BAG6P46379 1132 aa11.62□□□□□ -0.55
CACNB3-215ENST00000550190 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-215ENST00000550190 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
CACNB3-215ENST00000550190 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
CACNB3-215ENST00000550190 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-215ENST00000550190 TJP1Q07157 1748 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 PLSCR1O15162 318 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 GIGYF1O75420 1035 aaPredicted RBP11.61□□□□□ -0.55
CACNB3-215ENST00000550190 DEFB132Q7Z7B7 95 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 USP16Q9Y5T5 823 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 LAMB4A4D0S4 1761 aa11.61□□□□□ -0.55
CACNB3-215ENST00000550190 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
CACNB3-215ENST00000550190 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
CACNB3-215ENST00000550190 ITPK1Q13572 414 aa11.6□□□□□ -0.55
CACNB3-215ENST00000550190 EZH2Q15910 746 aaKnown RBP11.6□□□□□ -0.55
CACNB3-215ENST00000550190 TXNRD1Q16881 649 aa11.6□□□□□ -0.55
CACNB3-215ENST00000550190 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
CACNB3-215ENST00000550190 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
CACNB3-215ENST00000550190 TEX13AQ9BXU3 409 aaPredicted RBP11.6□□□□□ -0.55
CACNB3-215ENST00000550190 VAMP4O75379 141 aa11.59□□□□□ -0.55
CACNB3-215ENST00000550190 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
CACNB3-215ENST00000550190 ZNF831Q5JPB2 1677 aa11.59□□□□□ -0.55
CACNB3-215ENST00000550190 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-215ENST00000550190 STARD3NLO95772 234 aa11.58□□□□□ -0.56
CACNB3-215ENST00000550190 A1BGP04217 495 aa11.58□□□□□ -0.56
CACNB3-215ENST00000550190 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-215ENST00000550190 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
CACNB3-215ENST00000550190 PROM2Q8N271 834 aa11.58□□□□□ -0.56
CACNB3-215ENST00000550190 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms