RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PSME1Q06323 249 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 KDM4AO75164 1064 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 C16orf45Q96MC5 204 aaPredicted RBP12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 ME1P48163 572 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 APPP05067 770 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 CPLX2Q6PUV4 134 aaKnown RBP12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 PKP1Q13835 747 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 ANKRD1Q15327 319 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 NOL7Q9UMY1 257 aaKnown RBP12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 GJB2P29033 226 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 UBE2HP62256 183 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
SMARCC2-209ENST00000550164 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 ABCC2Q92887 1545 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 MAST1Q9Y2H9 1570 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 PES1O00541 588 aaKnown RBP12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 ZNF445P59923 1031 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
SMARCC2-209ENST00000550164 TEX35Q5T0J7 233 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 ZNF530Q6P9A1 599 aaPredicted RBP12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■■■□□ 18.3
SMARCC2-209ENST00000550164 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 STK38Q15208 465 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 BOLA2Q9H3K6 86 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 TRDNQ13061 729 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 TRIM29Q14134 588 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
SMARCC2-209ENST00000550164 CD109Q6YHK3 1445 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 GSPT1P15170 499 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 PDILTQ8N807 584 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 USHBP1Q8N6Y0 703 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 SH2B1Q9NRF2 756 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 TNNT1P13805 278 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 ZMYM3Q14202 1370 aa12.1□□□□□ -0.47
SMARCC2-209ENST00000550164 DTNBO60941 627 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 ANXA1P04083 346 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 ANAPC15P60006 121 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 DNM1Q05193 864 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
SMARCC2-209ENST00000550164 MYL6BP14649 208 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 RAPGEF4Q8WZA2 1011 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 ERVK-7P63135 1459 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 CHMLP26374 656 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 ZNF165P49910 485 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 C17orf53Q8N3J3 647 aaPredicted RBP12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
SMARCC2-209ENST00000550164 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 G2E3Q7L622 706 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 PPP1R9BQ96SB3 815 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 MSH6P52701 1360 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 CCDC66A2RUB6 948 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms