RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
SYT1-207ENST00000549559 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
SYT1-207ENST00000549559 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
SYT1-207ENST00000549559 RIPK4P57078 832 aa16.29■□□□□ 0.2
SYT1-207ENST00000549559 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
SYT1-207ENST00000549559 MRC1P22897 1456 aa16.29■□□□□ 0.2
SYT1-207ENST00000549559 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
SYT1-207ENST00000549559 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
SYT1-207ENST00000549559 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.2
SYT1-207ENST00000549559 ITGB4P16144 1822 aa16.27■□□□□ 0.2
SYT1-207ENST00000549559 TRIM37O94972 964 aa16.27■□□□□ 0.2
SYT1-207ENST00000549559 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
SYT1-207ENST00000549559 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
SYT1-207ENST00000549559 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
SYT1-207ENST00000549559 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
SYT1-207ENST00000549559 TNS1Q9HBL0 1735 aaKnown RBP16.26■□□□□ 0.19
SYT1-207ENST00000549559 KCNQ2O43526 872 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 CABP4P57796 275 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 TEFQ10587 303 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
SYT1-207ENST00000549559 BTAF1O14981 1849 aa16.25■□□□□ 0.19
SYT1-207ENST00000549559 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
SYT1-207ENST00000549559 MCM10Q7L590 875 aa16.25■□□□□ 0.19
SYT1-207ENST00000549559 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
SYT1-207ENST00000549559 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
SYT1-207ENST00000549559 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
SYT1-207ENST00000549559 PIGBQ92521 554 aa16.23■□□□□ 0.19
SYT1-207ENST00000549559 TRIM35Q9UPQ4 493 aa16.23■□□□□ 0.19
SYT1-207ENST00000549559 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
SYT1-207ENST00000549559 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
SYT1-207ENST00000549559 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
SYT1-207ENST00000549559 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
SYT1-207ENST00000549559 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
SYT1-207ENST00000549559 APBA3O96018 575 aa16.21■□□□□ 0.19
SYT1-207ENST00000549559 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
SYT1-207ENST00000549559 BAG6P46379 1132 aa16.2■□□□□ 0.18
SYT1-207ENST00000549559 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
SYT1-207ENST00000549559 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
SYT1-207ENST00000549559 RGPD3A6NKT7 1758 aaPredicted RBP16.2■□□□□ 0.18
SYT1-207ENST00000549559 RGPD4Q7Z3J3 1758 aa16.2■□□□□ 0.18
SYT1-207ENST00000549559 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
SYT1-207ENST00000549559 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
SYT1-207ENST00000549559 PALLDQ8WX93 1383 aa16.18■□□□□ 0.18
SYT1-207ENST00000549559 PLSCR1O15162 318 aa16.18■□□□□ 0.18
SYT1-207ENST00000549559 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
SYT1-207ENST00000549559 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
SYT1-207ENST00000549559 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
SYT1-207ENST00000549559 BTBD11A6QL63 1104 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 BABAM1Q9NWV8 329 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
SYT1-207ENST00000549559 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
SYT1-207ENST00000549559 LY75O60449 1722 aa16.15■□□□□ 0.18
SYT1-207ENST00000549559 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
SYT1-207ENST00000549559 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
SYT1-207ENST00000549559 IL16Q14005 1332 aa16.15■□□□□ 0.18
SYT1-207ENST00000549559 UBR2Q8IWV8 1755 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 SOCS7O14512 581 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 GNAI1P63096 354 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
SYT1-207ENST00000549559 EN1Q05925 392 aaPredicted RBP16.13■□□□□ 0.17
SYT1-207ENST00000549559 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
SYT1-207ENST00000549559 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
SYT1-207ENST00000549559 CAMKK2Q96RR4 588 aa16.13■□□□□ 0.17
SYT1-207ENST00000549559 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
SYT1-207ENST00000549559 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
SYT1-207ENST00000549559 ZNF831Q5JPB2 1677 aa16.12■□□□□ 0.17
SYT1-207ENST00000549559 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
SYT1-207ENST00000549559 CHL1O00533 1208 aa16.12■□□□□ 0.17
SYT1-207ENST00000549559 SIK1P57059 783 aa16.12■□□□□ 0.17
SYT1-207ENST00000549559 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
SYT1-207ENST00000549559 RREB1Q92766 1687 aa16.11■□□□□ 0.17
SYT1-207ENST00000549559 PTCD1O75127 700 aaKnown RBP16.11■□□□□ 0.17
SYT1-207ENST00000549559 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
SYT1-207ENST00000549559 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
SYT1-207ENST00000549559 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
SYT1-207ENST00000549559 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
SYT1-207ENST00000549559 CCNL1Q9UK58 526 aaPredicted RBP16.11■□□□□ 0.17
SYT1-207ENST00000549559 CICQ96RK0 1608 aaPredicted RBP16.1■□□□□ 0.17
SYT1-207ENST00000549559 KCNQ3O43525 872 aa16.1■□□□□ 0.17
SYT1-207ENST00000549559 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
SYT1-207ENST00000549559 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
SYT1-207ENST00000549559 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
SYT1-207ENST00000549559 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
SYT1-207ENST00000549559 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
SYT1-207ENST00000549559 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
SYT1-207ENST00000549559 ATP6V1AP38606 617 aa16.08■□□□□ 0.16
SYT1-207ENST00000549559 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
SYT1-207ENST00000549559 PROM2Q8N271 834 aa16.08■□□□□ 0.16
SYT1-207ENST00000549559 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms