RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TEFQ10587 303 aa27.67■■■□□ 2.02
CACNB3-210ENST00000548874 KAT6BQ8WYB5 2073 aa27.67■■■□□ 2.02
CACNB3-210ENST00000548874 WWC1Q8IX03 1113 aa27.66■■■□□ 2.02
CACNB3-210ENST00000548874 SALL2Q9Y467 1007 aaPredicted RBP27.64■■■□□ 2.02
CACNB3-210ENST00000548874 ZNF521Q96K83 1311 aa27.63■■■□□ 2.01
CACNB3-210ENST00000548874 PAPPAQ13219 1627 aa27.63■■■□□ 2.01
CACNB3-210ENST00000548874 CCDC125Q86Z20 511 aa27.62■■■□□ 2.01
CACNB3-210ENST00000548874 TAF7Q15545 349 aaPredicted RBP27.61■■■□□ 2.01
CACNB3-210ENST00000548874 UPF1Q92900 1129 aaKnown RBP eCLIP27.61■■■□□ 2.01
CACNB3-210ENST00000548874 ATG3Q9NT62 314 aa27.6■■■□□ 2.01
CACNB3-210ENST00000548874 CALD1Q05682 793 aaKnown RBP27.59■■■□□ 2.01
CACNB3-210ENST00000548874 ASAP1Q9ULH1 1129 aa27.59■■■□□ 2.01
CACNB3-210ENST00000548874 HNRNPUQ00839 825 aaKnown RBP eCLIP27.58■■■□□ 2.01
CACNB3-210ENST00000548874 WDR63Q8IWG1 891 aa27.58■■■□□ 2.01
CACNB3-210ENST00000548874 BTBD11A6QL63 1104 aa27.57■■■□□ 2
CACNB3-210ENST00000548874 APBA3O96018 575 aa27.57■■■□□ 2
CACNB3-210ENST00000548874 BABAM1Q9NWV8 329 aa27.57■■■□□ 2
CACNB3-210ENST00000548874 IL16Q14005 1332 aa27.57■■■□□ 2
CACNB3-210ENST00000548874 RGPD3A6NKT7 1758 aaPredicted RBP27.56■■■□□ 2
CACNB3-210ENST00000548874 KDM3BQ7LBC6 1761 aa27.56■■■□□ 2
CACNB3-210ENST00000548874 RGPD4Q7Z3J3 1758 aa27.56■■■□□ 2
CACNB3-210ENST00000548874 PLSCR1O15162 318 aa27.56■■■□□ 2
CACNB3-210ENST00000548874 ZNF853P0CG23 659 aa27.56■■■□□ 2
CACNB3-210ENST00000548874 SMARCC1Q92922 1105 aaPredicted RBP27.56■■■□□ 2
CACNB3-210ENST00000548874 PALLDQ8WX93 1383 aa27.56■■■□□ 2
CACNB3-210ENST00000548874 CHL1O00533 1208 aa27.55■■■□□ 2
CACNB3-210ENST00000548874 SLC39A6Q13433 755 aa27.55■■■□□ 2
CACNB3-210ENST00000548874 SF3B2Q13435 895 aaKnown RBP27.55■■■□□ 2
CACNB3-210ENST00000548874 CFAP44Q96MT7 982 aa27.55■■■□□ 2
CACNB3-210ENST00000548874 IFT57Q9NWB7 429 aa27.55■■■□□ 2
CACNB3-210ENST00000548874 UBR2Q8IWV8 1755 aa27.55■■■□□ 2
CACNB3-210ENST00000548874 LY75O60449 1722 aa27.54■■■□□ 2
CACNB3-210ENST00000548874 ZNF790Q6PG37 636 aa27.54■■■□□ 2
CACNB3-210ENST00000548874 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
CACNB3-210ENST00000548874 MIS18AQ9NYP9 233 aa27.54■■■□□ 2
CACNB3-210ENST00000548874 KCNQ3O43525 872 aa27.52■■■□□ 2
CACNB3-210ENST00000548874 GNAI1P63096 354 aa27.52■■■□□ 2
CACNB3-210ENST00000548874 BAG6P46379 1132 aa27.51■■□□□ 1.99
CACNB3-210ENST00000548874 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
CACNB3-210ENST00000548874 TTC5Q8N0Z6 440 aa27.5■■□□□ 1.99
CACNB3-210ENST00000548874 ZBED9Q6R2W3 1325 aa27.49■■□□□ 1.99
CACNB3-210ENST00000548874 CAMKK2Q96RR4 588 aa27.49■■□□□ 1.99
CACNB3-210ENST00000548874 LAS1LQ9Y4W2 734 aaKnown RBP27.49■■□□□ 1.99
CACNB3-210ENST00000548874 ZNF831Q5JPB2 1677 aa27.49■■□□□ 1.99
CACNB3-210ENST00000548874 DEFB132Q7Z7B7 95 aa27.48■■□□□ 1.99
CACNB3-210ENST00000548874 SPINK5Q9NQ38 1064 aaPredicted RBP27.48■■□□□ 1.99
CACNB3-210ENST00000548874 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
CACNB3-210ENST00000548874 LOC102724428A0A0B4J2F2 783 aa27.47■■□□□ 1.99
CACNB3-210ENST00000548874 SIK1P57059 783 aa27.47■■□□□ 1.99
CACNB3-210ENST00000548874 EN1Q05925 392 aaPredicted RBP27.47■■□□□ 1.99
CACNB3-210ENST00000548874 GOLGA2Q08379 1002 aa27.47■■□□□ 1.99
CACNB3-210ENST00000548874 PROM2Q8N271 834 aa27.47■■□□□ 1.99
CACNB3-210ENST00000548874 ZNF496Q96IT1 587 aaPredicted RBP27.47■■□□□ 1.99
CACNB3-210ENST00000548874 SLC4A9Q96Q91 983 aa27.47■■□□□ 1.99
CACNB3-210ENST00000548874 CICQ96RK0 1608 aaPredicted RBP27.47■■□□□ 1.99
CACNB3-210ENST00000548874 PTCD1O75127 700 aaKnown RBP27.46■■□□□ 1.99
CACNB3-210ENST00000548874 EIF4A1P60842 406 aaKnown RBP27.46■■□□□ 1.99
CACNB3-210ENST00000548874 HEG1Q9ULI3 1381 aa27.46■■□□□ 1.99
CACNB3-210ENST00000548874 TXNRD1Q16881 649 aa27.45■■□□□ 1.98
CACNB3-210ENST00000548874 FMNL2Q96PY5 1086 aa27.45■■□□□ 1.98
CACNB3-210ENST00000548874 RREB1Q92766 1687 aa27.44■■□□□ 1.98
CACNB3-210ENST00000548874 EZH2Q15910 746 aaKnown RBP27.44■■□□□ 1.98
CACNB3-210ENST00000548874 SLC27A3Q5K4L6 730 aa27.44■■□□□ 1.98
CACNB3-210ENST00000548874 RBM42Q9BTD8 480 aaKnown RBP27.44■■□□□ 1.98
CACNB3-210ENST00000548874 SOCS7O14512 581 aa27.43■■□□□ 1.98
CACNB3-210ENST00000548874 VSIG10Q8N0Z9 540 aa27.43■■□□□ 1.98
CACNB3-210ENST00000548874 SLFN5Q08AF3 891 aa27.42■■□□□ 1.98
CACNB3-210ENST00000548874 TSR2Q969E8 191 aaKnown RBP27.42■■□□□ 1.98
CACNB3-210ENST00000548874 LRRC4BQ9NT99 713 aa27.42■■□□□ 1.98
CACNB3-210ENST00000548874 CCNL1Q9UK58 526 aaPredicted RBP27.42■■□□□ 1.98
CACNB3-210ENST00000548874 FANCIQ9NVI1 1328 aa27.41■■□□□ 1.98
CACNB3-210ENST00000548874 TJP1Q07157 1748 aa27.41■■□□□ 1.98
CACNB3-210ENST00000548874 E9PSI1 815 aa27.41■■□□□ 1.98
CACNB3-210ENST00000548874 CDCA7LQ96GN5 454 aa27.41■■□□□ 1.98
CACNB3-210ENST00000548874 MYH16Q9H6N6 1097 aa27.41■■□□□ 1.98
CACNB3-210ENST00000548874 ATP6V1AP38606 617 aa27.4■■□□□ 1.98
CACNB3-210ENST00000548874 ITPK1Q13572 414 aa27.4■■□□□ 1.98
CACNB3-210ENST00000548874 KCNQ4P56696 695 aa27.39■■□□□ 1.98
CACNB3-210ENST00000548874 TRMT2AQ8IZ69 625 aaKnown RBP27.39■■□□□ 1.98
CACNB3-210ENST00000548874 TAF1LQ8IZX4 1826 aa27.37■■□□□ 1.97
CACNB3-210ENST00000548874 GIGYF1O75420 1035 aaPredicted RBP27.37■■□□□ 1.97
CACNB3-210ENST00000548874 SNRPA1P09661 255 aaKnown RBP27.37■■□□□ 1.97
CACNB3-210ENST00000548874 NUP188Q5SRE5 1749 aa27.37■■□□□ 1.97
CACNB3-210ENST00000548874 C5P01031 1676 aa27.36■■□□□ 1.97
CACNB3-210ENST00000548874 COL5A3P25940 1745 aaPredicted RBP27.36■■□□□ 1.97
CACNB3-210ENST00000548874 KRT24Q2M2I5 525 aa27.36■■□□□ 1.97
CACNB3-210ENST00000548874 DNAJC10Q8IXB1 793 aa27.36■■□□□ 1.97
CACNB3-210ENST00000548874 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
CACNB3-210ENST00000548874 YTHDC1Q96MU7 727 aaKnown RBP27.35■■□□□ 1.97
CACNB3-210ENST00000548874 LINC00116Q8NCU8 138 aa27.34■■□□□ 1.97
CACNB3-210ENST00000548874 TEX13AQ9BXU3 409 aaPredicted RBP27.34■■□□□ 1.97
CACNB3-210ENST00000548874 LAMB4A4D0S4 1761 aa27.33■■□□□ 1.97
CACNB3-210ENST00000548874 HOXB7P09629 217 aa27.33■■□□□ 1.97
CACNB3-210ENST00000548874 DUSP27Q5VZP5 1158 aa27.33■■□□□ 1.97
CACNB3-210ENST00000548874 C8orf58Q8NAV2 365 aa27.33■■□□□ 1.97
CACNB3-210ENST00000548874 CYP19A1P11511 503 aaPredicted RBP27.32■■□□□ 1.96
CACNB3-210ENST00000548874 HMGB2P26583 209 aaKnown RBP27.32■■□□□ 1.96
CACNB3-210ENST00000548874 C4BP0C0L5 1744 aa27.31■■□□□ 1.96
CACNB3-210ENST00000548874 EXOSC9Q06265 439 aaKnown RBP27.31■■□□□ 1.96
CACNB3-210ENST00000548874 USP16Q9Y5T5 823 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms