RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-209ENST00000548860 ZRSR1Q15695 479 aaKnown RBP17.09■□□□□ 0.33
CACNB3-209ENST00000548860 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 KLHDC4Q8TBB5 520 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
CACNB3-209ENST00000548860 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
CACNB3-209ENST00000548860 USP25Q9UHP3 1055 aa17.09■□□□□ 0.33
CACNB3-209ENST00000548860 CCDC173Q0VFZ6 552 aa17.08■□□□□ 0.33
CACNB3-209ENST00000548860 RBSNQ9H1K0 784 aa17.08■□□□□ 0.33
CACNB3-209ENST00000548860 FAM173BQ6P4H8 233 aa17.08■□□□□ 0.32
CACNB3-209ENST00000548860 BICD2Q8TD16 824 aa17.08■□□□□ 0.32
CACNB3-209ENST00000548860 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
CACNB3-209ENST00000548860 CEP152O94986 1710 aa17.08■□□□□ 0.32
CACNB3-209ENST00000548860 H3BQV1 296 aa17.07■□□□□ 0.32
CACNB3-209ENST00000548860 LTKP29376 864 aa17.07■□□□□ 0.32
CACNB3-209ENST00000548860 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
CACNB3-209ENST00000548860 SBNO2Q9Y2G9 1366 aa17.07■□□□□ 0.32
CACNB3-209ENST00000548860 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
CACNB3-209ENST00000548860 CHL1O00533 1208 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
CACNB3-209ENST00000548860 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 TET3O43151 1660 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 CNPY2Q9Y2B0 182 aa17.06■□□□□ 0.32
CACNB3-209ENST00000548860 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
CACNB3-209ENST00000548860 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
CACNB3-209ENST00000548860 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
CACNB3-209ENST00000548860 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
CACNB3-209ENST00000548860 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
CACNB3-209ENST00000548860 C17orf53Q8N3J3 647 aaPredicted RBP17.05■□□□□ 0.32
CACNB3-209ENST00000548860 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
CACNB3-209ENST00000548860 PPRC1Q5VV67 1664 aaKnown RBP17.05■□□□□ 0.32
CACNB3-209ENST00000548860 MAP3K4Q9Y6R4 1608 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-209ENST00000548860 ZSCAN30Q86W11 494 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-209ENST00000548860 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-209ENST00000548860 CKAP2LQ8IYA6 745 aa17.04■□□□□ 0.32
CACNB3-209ENST00000548860 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
CACNB3-209ENST00000548860 ABCC4O15439 1325 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 KIF2CQ99661 725 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 KCNA6P17658 529 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
CACNB3-209ENST00000548860 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 TAF7LQ5H9L4 462 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 PTPRCP08575 1304 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 KIF1BO60333 1816 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.32
CACNB3-209ENST00000548860 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
CACNB3-209ENST00000548860 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.31
CACNB3-209ENST00000548860 PDRG1Q9NUG6 133 aa17.02■□□□□ 0.31
CACNB3-209ENST00000548860 CHMLP26374 656 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 CLCN1P35523 988 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 USP48Q86UV5 1035 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 TMEM63CQ9P1W3 806 aa17.01■□□□□ 0.31
CACNB3-209ENST00000548860 PHF14O94880 888 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
CACNB3-209ENST00000548860 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
CACNB3-209ENST00000548860 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
CACNB3-209ENST00000548860 TTC12Q9H892 705 aaPredicted RBP17■□□□□ 0.31
CACNB3-209ENST00000548860 NPHP1O15259 732 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 TSC1Q92574 1164 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 MYOM2P54296 1465 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 IL17REQ8NFR9 667 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 RTL1A6NKG5 1358 aa17■□□□□ 0.31
CACNB3-209ENST00000548860 MBD3O95983 291 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-209ENST00000548860 LAMC1P11047 1609 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 UQCRHP07919 91 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 LMBRD1Q9NUN5 540 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms