RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RBM42Q9BTD8 480 aaKnown RBP21.12■□□□□ 0.97
DDX54-205ENST00000548786 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
DDX54-205ENST00000548786 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
DDX54-205ENST00000548786 C4BP0C0L5 1744 aa21.1■□□□□ 0.97
DDX54-205ENST00000548786 ATP6V1AP38606 617 aa21.1■□□□□ 0.97
DDX54-205ENST00000548786 ITPK1Q13572 414 aa21.1■□□□□ 0.97
DDX54-205ENST00000548786 SMIM5Q71RC9 77 aa21.1■□□□□ 0.97
DDX54-205ENST00000548786 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
DDX54-205ENST00000548786 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
DDX54-205ENST00000548786 RNMTO43148 476 aaKnown RBP21.09■□□□□ 0.97
DDX54-205ENST00000548786 PTCD1O75127 700 aaKnown RBP21.09■□□□□ 0.97
DDX54-205ENST00000548786 AK7Q96M32 723 aa21.09■□□□□ 0.97
DDX54-205ENST00000548786 RALBP1Q15311 655 aa21.08■□□□□ 0.97
DDX54-205ENST00000548786 QSER1Q2KHR3 1735 aa21.08■□□□□ 0.97
DDX54-205ENST00000548786 MTFR1LQ9H019 292 aa21.08■□□□□ 0.97
DDX54-205ENST00000548786 MAP3K5Q99683 1374 aa21.08■□□□□ 0.96
DDX54-205ENST00000548786 PHF14O94880 888 aa21.07■□□□□ 0.96
DDX54-205ENST00000548786 PTGER2P43116 358 aa21.07■□□□□ 0.96
DDX54-205ENST00000548786 GAS2L2Q8NHY3 880 aa21.07■□□□□ 0.96
DDX54-205ENST00000548786 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
DDX54-205ENST00000548786 SLC52A2Q9HAB3 445 aa21.07■□□□□ 0.96
DDX54-205ENST00000548786 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
DDX54-205ENST00000548786 COL23A1Q86Y22 540 aaPredicted RBP21.06■□□□□ 0.96
DDX54-205ENST00000548786 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
DDX54-205ENST00000548786 GNAT3A8MTJ3 354 aa21.04■□□□□ 0.96
DDX54-205ENST00000548786 MSL1Q68DK7 614 aa21.04■□□□□ 0.96
DDX54-205ENST00000548786 MRC1P22897 1456 aa21.04■□□□□ 0.96
DDX54-205ENST00000548786 GNPATO15228 680 aa21.03■□□□□ 0.96
DDX54-205ENST00000548786 FCHSD2O94868 740 aa21.03■□□□□ 0.96
DDX54-205ENST00000548786 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
DDX54-205ENST00000548786 IL17REQ8NFR9 667 aa21.02■□□□□ 0.96
DDX54-205ENST00000548786 MYBBP1AQ9BQG0 1328 aaKnown RBP21.02■□□□□ 0.95
DDX54-205ENST00000548786 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
DDX54-205ENST00000548786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
DDX54-205ENST00000548786 TEFQ10587 303 aa21■□□□□ 0.95
DDX54-205ENST00000548786 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
DDX54-205ENST00000548786 COL5A3P25940 1745 aaPredicted RBP20.99■□□□□ 0.95
DDX54-205ENST00000548786 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
DDX54-205ENST00000548786 KLHL34Q8N239 644 aa20.99■□□□□ 0.95
DDX54-205ENST00000548786 SLC16A10Q8TF71 515 aa20.99■□□□□ 0.95
DDX54-205ENST00000548786 TJP1Q07157 1748 aa20.98■□□□□ 0.95
DDX54-205ENST00000548786 HMGB2P26583 209 aaKnown RBP20.98■□□□□ 0.95
DDX54-205ENST00000548786 MCM10Q7L590 875 aa20.98■□□□□ 0.95
DDX54-205ENST00000548786 ZNF831Q5JPB2 1677 aa20.97■□□□□ 0.95
DDX54-205ENST00000548786 POLD1P28340 1107 aa20.97■□□□□ 0.95
DDX54-205ENST00000548786 DCTN1Q14203 1278 aa20.97■□□□□ 0.95
DDX54-205ENST00000548786 ARXQ96QS3 562 aa20.97■□□□□ 0.95
DDX54-205ENST00000548786 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
DDX54-205ENST00000548786 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
DDX54-205ENST00000548786 NEFMP07197 916 aa20.96■□□□□ 0.95
DDX54-205ENST00000548786 FLAD1Q8NFF5 587 aa20.96■□□□□ 0.95
DDX54-205ENST00000548786 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
DDX54-205ENST00000548786 PRKRIP1Q9H875 184 aaPredicted RBP20.96■□□□□ 0.95
DDX54-205ENST00000548786 SSFA2P28290 1259 aa20.95■□□□□ 0.94
DDX54-205ENST00000548786 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
DDX54-205ENST00000548786 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
DDX54-205ENST00000548786 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
DDX54-205ENST00000548786 CRKLP46109 303 aaKnown RBP20.94■□□□□ 0.94
DDX54-205ENST00000548786 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
DDX54-205ENST00000548786 CNTNAP4Q9C0A0 1308 aa20.94■□□□□ 0.94
DDX54-205ENST00000548786 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
DDX54-205ENST00000548786 CEMIPQ8WUJ3 1361 aa20.94■□□□□ 0.94
DDX54-205ENST00000548786 PLEKHF1Q96S99 279 aa20.93■□□□□ 0.94
DDX54-205ENST00000548786 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
DDX54-205ENST00000548786 UBR2Q8IWV8 1755 aa20.92■□□□□ 0.94
DDX54-205ENST00000548786 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 KCNQ3O43525 872 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 COL24A1Q17RW2 1714 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 RC3H1Q5TC82 1133 aaKnown RBP20.91■□□□□ 0.94
DDX54-205ENST00000548786 ZNF790Q6PG37 636 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 CCDC146Q8IYE0 955 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 DLG5Q8TDM6 1919 aa20.91■□□□□ 0.94
DDX54-205ENST00000548786 WDR43Q15061 677 aaKnown RBP eCLIP20.9■□□□□ 0.94
DDX54-205ENST00000548786 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
DDX54-205ENST00000548786 SYT17Q9BSW7 474 aa20.9■□□□□ 0.94
DDX54-205ENST00000548786 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.94
DDX54-205ENST00000548786 RPS6KA4O75676 772 aa20.89■□□□□ 0.93
DDX54-205ENST00000548786 NFE2L2Q16236 605 aa20.89■□□□□ 0.93
DDX54-205ENST00000548786 ARHGEF1Q92888 912 aaKnown RBP20.89■□□□□ 0.93
DDX54-205ENST00000548786 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
DDX54-205ENST00000548786 INTS5Q6P9B9 1019 aaKnown RBP20.88■□□□□ 0.93
DDX54-205ENST00000548786 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
DDX54-205ENST00000548786 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
DDX54-205ENST00000548786 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
DDX54-205ENST00000548786 CYP19A1P11511 503 aaPredicted RBP20.87■□□□□ 0.93
DDX54-205ENST00000548786 RFC4P35249 363 aa20.87■□□□□ 0.93
DDX54-205ENST00000548786 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
DDX54-205ENST00000548786 RRP7AQ9Y3A4 280 aaKnown RBP20.87■□□□□ 0.93
DDX54-205ENST00000548786 SRP68Q9UHB9 627 aaKnown RBP20.86■□□□□ 0.93
DDX54-205ENST00000548786 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
DDX54-205ENST00000548786 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
DDX54-205ENST00000548786 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
DDX54-205ENST00000548786 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
DDX54-205ENST00000548786 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
DDX54-205ENST00000548786 ADRA2BP18089 450 aa20.84■□□□□ 0.93
DDX54-205ENST00000548786 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
DDX54-205ENST00000548786 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
DDX54-205ENST00000548786 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
DDX54-205ENST00000548786 NLGN2Q8NFZ4 835 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms