RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 NEUROD2Q15784 382 aa22.72■■□□□ 1.23
LETMD1-216ENST00000548401 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
LETMD1-216ENST00000548401 PIGBQ92521 554 aa22.72■■□□□ 1.23
LETMD1-216ENST00000548401 TMOD3Q9NYL9 352 aa22.72■■□□□ 1.23
LETMD1-216ENST00000548401 CICQ96RK0 1608 aaPredicted RBP22.71■■□□□ 1.23
LETMD1-216ENST00000548401 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
LETMD1-216ENST00000548401 CABP4P57796 275 aa22.71■■□□□ 1.23
LETMD1-216ENST00000548401 KCPQ6ZWJ8 1503 aa22.71■■□□□ 1.23
LETMD1-216ENST00000548401 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
LETMD1-216ENST00000548401 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
LETMD1-216ENST00000548401 ZNF831Q5JPB2 1677 aa22.68■■□□□ 1.22
LETMD1-216ENST00000548401 CCDC125Q86Z20 511 aa22.68■■□□□ 1.22
LETMD1-216ENST00000548401 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
LETMD1-216ENST00000548401 TEFQ10587 303 aa22.67■■□□□ 1.22
LETMD1-216ENST00000548401 NUP188Q5SRE5 1749 aa22.67■■□□□ 1.22
LETMD1-216ENST00000548401 TJP1Q07157 1748 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 ZNF521Q96K83 1311 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 ATG3Q9NT62 314 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
LETMD1-216ENST00000548401 APBA3O96018 575 aa22.64■■□□□ 1.21
LETMD1-216ENST00000548401 PLSCR1O15162 318 aa22.63■■□□□ 1.21
LETMD1-216ENST00000548401 COL5A3P25940 1745 aaPredicted RBP22.62■■□□□ 1.21
LETMD1-216ENST00000548401 C5P01031 1676 aa22.62■■□□□ 1.21
LETMD1-216ENST00000548401 TAF1LQ8IZX4 1826 aa22.62■■□□□ 1.21
LETMD1-216ENST00000548401 SF3B2Q13435 895 aaKnown RBP22.62■■□□□ 1.21
LETMD1-216ENST00000548401 DEFB132Q7Z7B7 95 aa22.62■■□□□ 1.21
LETMD1-216ENST00000548401 BAG6P46379 1132 aa22.61■■□□□ 1.21
LETMD1-216ENST00000548401 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
LETMD1-216ENST00000548401 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
LETMD1-216ENST00000548401 SMARCC1Q92922 1105 aaPredicted RBP22.61■■□□□ 1.21
LETMD1-216ENST00000548401 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
LETMD1-216ENST00000548401 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
LETMD1-216ENST00000548401 LAMB4A4D0S4 1761 aa22.59■■□□□ 1.21
LETMD1-216ENST00000548401 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
LETMD1-216ENST00000548401 SOCS7O14512 581 aa22.59■■□□□ 1.21
LETMD1-216ENST00000548401 EN1Q05925 392 aaPredicted RBP22.59■■□□□ 1.21
LETMD1-216ENST00000548401 ZNF790Q6PG37 636 aa22.59■■□□□ 1.21
LETMD1-216ENST00000548401 KCNQ3O43525 872 aa22.58■■□□□ 1.21
LETMD1-216ENST00000548401 ZNF853P0CG23 659 aa22.58■■□□□ 1.21
LETMD1-216ENST00000548401 PROM2Q8N271 834 aa22.58■■□□□ 1.21
LETMD1-216ENST00000548401 IL16Q14005 1332 aa22.57■■□□□ 1.2
LETMD1-216ENST00000548401 CALD1Q05682 793 aaKnown RBP22.57■■□□□ 1.2
LETMD1-216ENST00000548401 EZH2Q15910 746 aaKnown RBP22.57■■□□□ 1.2
LETMD1-216ENST00000548401 SLC4A9Q96Q91 983 aa22.57■■□□□ 1.2
LETMD1-216ENST00000548401 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
LETMD1-216ENST00000548401 BABAM1Q9NWV8 329 aa22.57■■□□□ 1.2
LETMD1-216ENST00000548401 CHL1O00533 1208 aa22.56■■□□□ 1.2
LETMD1-216ENST00000548401 TXNRD1Q16881 649 aa22.56■■□□□ 1.2
LETMD1-216ENST00000548401 CFAP44Q96MT7 982 aa22.56■■□□□ 1.2
LETMD1-216ENST00000548401 MIS18AQ9NYP9 233 aa22.56■■□□□ 1.2
LETMD1-216ENST00000548401 LOC102724428A0A0B4J2F2 783 aa22.55■■□□□ 1.2
LETMD1-216ENST00000548401 SIK1P57059 783 aa22.55■■□□□ 1.2
LETMD1-216ENST00000548401 WDR63Q8IWG1 891 aa22.55■■□□□ 1.2
LETMD1-216ENST00000548401 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
LETMD1-216ENST00000548401 LRRC4BQ9NT99 713 aa22.55■■□□□ 1.2
LETMD1-216ENST00000548401 TSPYL4Q9UJ04 414 aa22.55■■□□□ 1.2
LETMD1-216ENST00000548401 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
LETMD1-216ENST00000548401 HEG1Q9ULI3 1381 aa22.54■■□□□ 1.2
LETMD1-216ENST00000548401 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
LETMD1-216ENST00000548401 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
LETMD1-216ENST00000548401 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
LETMD1-216ENST00000548401 SLC27A3Q5K4L6 730 aa22.53■■□□□ 1.2
LETMD1-216ENST00000548401 MBIPQ9NS73 344 aa22.53■■□□□ 1.2
LETMD1-216ENST00000548401 CCNL1Q9UK58 526 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-216ENST00000548401 GNAI1P63096 354 aa22.52■■□□□ 1.2
LETMD1-216ENST00000548401 ITPK1Q13572 414 aa22.52■■□□□ 1.2
LETMD1-216ENST00000548401 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
LETMD1-216ENST00000548401 TUBGCP6Q96RT7 1819 aa22.52■■□□□ 1.2
LETMD1-216ENST00000548401 KCNQ4P56696 695 aa22.51■■□□□ 1.19
LETMD1-216ENST00000548401 EIF4A1P60842 406 aaKnown RBP22.51■■□□□ 1.19
LETMD1-216ENST00000548401 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
LETMD1-216ENST00000548401 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
LETMD1-216ENST00000548401 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
LETMD1-216ENST00000548401 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
LETMD1-216ENST00000548401 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
LETMD1-216ENST00000548401 VSIG10Q8N0Z9 540 aa22.49■■□□□ 1.19
LETMD1-216ENST00000548401 MYH14Q7Z406 1995 aaKnown RBP22.49■■□□□ 1.19
LETMD1-216ENST00000548401 QSER1Q2KHR3 1735 aa22.48■■□□□ 1.19
LETMD1-216ENST00000548401 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
LETMD1-216ENST00000548401 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
LETMD1-216ENST00000548401 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
LETMD1-216ENST00000548401 ATP6V1AP38606 617 aa22.47■■□□□ 1.19
LETMD1-216ENST00000548401 GOLGA2Q08379 1002 aa22.46■■□□□ 1.19
LETMD1-216ENST00000548401 KRT24Q2M2I5 525 aa22.46■■□□□ 1.19
LETMD1-216ENST00000548401 DNAJC10Q8IXB1 793 aa22.46■■□□□ 1.19
LETMD1-216ENST00000548401 ANO8Q9HCE9 1232 aaPredicted RBP22.46■■□□□ 1.19
LETMD1-216ENST00000548401 PRAMEF22A3QJZ6 481 aa22.45■■□□□ 1.18
LETMD1-216ENST00000548401 GIGYF1O75420 1035 aaPredicted RBP22.44■■□□□ 1.18
LETMD1-216ENST00000548401 CNTNAP4Q9C0A0 1308 aa22.44■■□□□ 1.18
LETMD1-216ENST00000548401 E9PSI1 815 aa22.43■■□□□ 1.18
LETMD1-216ENST00000548401 SNRPA1P09661 255 aaKnown RBP22.43■■□□□ 1.18
LETMD1-216ENST00000548401 SLFN5Q08AF3 891 aa22.43■■□□□ 1.18
LETMD1-216ENST00000548401 ZNF827Q17R98 1081 aa22.43■■□□□ 1.18
LETMD1-216ENST00000548401 CDCA7LQ96GN5 454 aa22.43■■□□□ 1.18
LETMD1-216ENST00000548401 CYP19A1P11511 503 aaPredicted RBP22.42■■□□□ 1.18
LETMD1-216ENST00000548401 AKT1S1Q96B36 256 aa22.42■■□□□ 1.18
LETMD1-216ENST00000548401 MYH16Q9H6N6 1097 aa22.42■■□□□ 1.18
LETMD1-216ENST00000548401 C4AP0C0L4 1744 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms