RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 PNPLA7Q6ZV29 1317 aa10.66□□□□□ -0.7
PRIM1-203ENST00000548173 HMGB2P26583 209 aaKnown RBP10.66□□□□□ -0.7
PRIM1-203ENST00000548173 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
PRIM1-203ENST00000548173 ATG3Q9NT62 314 aa10.66□□□□□ -0.7
PRIM1-203ENST00000548173 TFCP2L1Q9NZI6 479 aa10.66□□□□□ -0.7
PRIM1-203ENST00000548173 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
PRIM1-203ENST00000548173 QSER1Q2KHR3 1735 aa10.66□□□□□ -0.7
PRIM1-203ENST00000548173 LOC102724428A0A0B4J2F2 783 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
PRIM1-203ENST00000548173 SIK1P57059 783 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 CABP4P57796 275 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 AKAP4Q5JQC9 854 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 CFAP53Q96M91 514 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
PRIM1-203ENST00000548173 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.71
PRIM1-203ENST00000548173 C5P01031 1676 aa10.64□□□□□ -0.71
PRIM1-203ENST00000548173 TUBGCP6Q96RT7 1819 aa10.64□□□□□ -0.71
PRIM1-203ENST00000548173 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
PRIM1-203ENST00000548173 PPP1R1BQ9UD71 204 aaPredicted RBP10.64□□□□□ -0.71
PRIM1-203ENST00000548173 ITPK1Q13572 414 aa10.63□□□□□ -0.71
PRIM1-203ENST00000548173 COL23A1Q86Y22 540 aaPredicted RBP10.63□□□□□ -0.71
PRIM1-203ENST00000548173 NFATC2IPQ8NCF5 419 aa10.63□□□□□ -0.71
PRIM1-203ENST00000548173 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
PRIM1-203ENST00000548173 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 RNMTO43148 476 aaKnown RBP10.62□□□□□ -0.71
PRIM1-203ENST00000548173 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 LINC00116Q8NCU8 138 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 NUDCQ9Y266 331 aa10.62□□□□□ -0.71
PRIM1-203ENST00000548173 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
PRIM1-203ENST00000548173 AMIGO3Q86WK7 504 aa10.61□□□□□ -0.71
PRIM1-203ENST00000548173 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
PRIM1-203ENST00000548173 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
PRIM1-203ENST00000548173 SLC52A2Q9HAB3 445 aa10.61□□□□□ -0.71
PRIM1-203ENST00000548173 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 ZEB1P37275 1124 aaPredicted RBP10.6□□□□□ -0.71
PRIM1-203ENST00000548173 GAS2L2Q8NHY3 880 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 PHACTR3Q96KR7 559 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 AK7Q96M32 723 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
PRIM1-203ENST00000548173 COL24A1Q17RW2 1714 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 MRC1P22897 1456 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
PRIM1-203ENST00000548173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
PRIM1-203ENST00000548173 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
PRIM1-203ENST00000548173 FCHSD2O94868 740 aa10.59□□□□□ -0.71
PRIM1-203ENST00000548173 U2AF1L5P0DN76 240 aaPredicted RBP10.59□□□□□ -0.71
PRIM1-203ENST00000548173 U2AF1Q01081 240 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRIM1-203ENST00000548173 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
PRIM1-203ENST00000548173 ARXQ96QS3 562 aa10.59□□□□□ -0.71
PRIM1-203ENST00000548173 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
PRIM1-203ENST00000548173 UBR3Q6ZT12 1888 aa10.59□□□□□ -0.71
PRIM1-203ENST00000548173 MAP3K5Q99683 1374 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 GNPATO15228 680 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 SSFA2P28290 1259 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 RALBP1Q15311 655 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 RC3H1Q5TC82 1133 aaKnown RBP10.58□□□□□ -0.72
PRIM1-203ENST00000548173 IL17REQ8NFR9 667 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
PRIM1-203ENST00000548173 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
PRIM1-203ENST00000548173 PHF14O94880 888 aa10.57□□□□□ -0.72
PRIM1-203ENST00000548173 POLD1P28340 1107 aa10.57□□□□□ -0.72
PRIM1-203ENST00000548173 SLC39A6Q13433 755 aa10.57□□□□□ -0.72
PRIM1-203ENST00000548173 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
PRIM1-203ENST00000548173 COL5A3P25940 1745 aaPredicted RBP10.56□□□□□ -0.72
PRIM1-203ENST00000548173 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
PRIM1-203ENST00000548173 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
PRIM1-203ENST00000548173 RTCBQ9Y3I0 505 aaKnown RBP10.56□□□□□ -0.72
PRIM1-203ENST00000548173 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
PRIM1-203ENST00000548173 CICQ96RK0 1608 aaPredicted RBP10.55□□□□□ -0.72
PRIM1-203ENST00000548173 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
PRIM1-203ENST00000548173 CRKLP46109 303 aaKnown RBP10.55□□□□□ -0.72
PRIM1-203ENST00000548173 KCPQ6ZWJ8 1503 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 TJP1Q07157 1748 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 TEFQ10587 303 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 POTEHQ6S545 545 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 DNAJC10Q8IXB1 793 aa10.54□□□□□ -0.72
PRIM1-203ENST00000548173 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
PRIM1-203ENST00000548173 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
PRIM1-203ENST00000548173 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
PRIM1-203ENST00000548173 ARHGEF1Q92888 912 aaKnown RBP10.53□□□□□ -0.72
PRIM1-203ENST00000548173 PLEKHF1Q96S99 279 aa10.53□□□□□ -0.72
PRIM1-203ENST00000548173 MYBBP1AQ9BQG0 1328 aaKnown RBP10.53□□□□□ -0.72
PRIM1-203ENST00000548173 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.72
PRIM1-203ENST00000548173 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
PRIM1-203ENST00000548173 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-203ENST00000548173 CYP19A1P11511 503 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-203ENST00000548173 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
PRIM1-203ENST00000548173 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
PRIM1-203ENST00000548173 ZNF496Q96IT1 587 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-203ENST00000548173 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.73
PRIM1-203ENST00000548173 NEFMP07197 916 aa10.51□□□□□ -0.73
PRIM1-203ENST00000548173 RFC4P35249 363 aa10.51□□□□□ -0.73
PRIM1-203ENST00000548173 DCTN1Q14203 1278 aa10.51□□□□□ -0.73
PRIM1-203ENST00000548173 MCM10Q7L590 875 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms