RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 RNF123Q5XPI4 1314 aa19.34■□□□□ 0.69
LETMD1-212ENST00000547877 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
LETMD1-212ENST00000547877 TAF7Q15545 349 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-212ENST00000547877 TSR2Q969E8 191 aaKnown RBP19.33■□□□□ 0.68
LETMD1-212ENST00000547877 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.68
LETMD1-212ENST00000547877 TOGARAM1Q9Y4F4 1720 aa19.33■□□□□ 0.68
LETMD1-212ENST00000547877 MRC1P22897 1456 aa19.33■□□□□ 0.68
LETMD1-212ENST00000547877 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 FANCIQ9NVI1 1328 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 CHL1O00533 1208 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 MBIPQ9NS73 344 aa19.32■□□□□ 0.68
LETMD1-212ENST00000547877 SIPA1L3O60292 1781 aaPredicted RBP19.31■□□□□ 0.68
LETMD1-212ENST00000547877 CABP4P57796 275 aa19.3■□□□□ 0.68
LETMD1-212ENST00000547877 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
LETMD1-212ENST00000547877 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
LETMD1-212ENST00000547877 BRWD3Q6RI45 1802 aa19.29■□□□□ 0.68
LETMD1-212ENST00000547877 BTBD11A6QL63 1104 aa19.29■□□□□ 0.68
LETMD1-212ENST00000547877 FAM182BQ5T319 152 aa19.29■□□□□ 0.68
LETMD1-212ENST00000547877 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
LETMD1-212ENST00000547877 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
LETMD1-212ENST00000547877 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
LETMD1-212ENST00000547877 RGS12O14924 1447 aa19.28■□□□□ 0.68
LETMD1-212ENST00000547877 KRT27Q7Z3Y8 459 aa19.27■□□□□ 0.68
LETMD1-212ENST00000547877 ITGB4P16144 1822 aa19.27■□□□□ 0.67
LETMD1-212ENST00000547877 SYTL4Q96C24 671 aaPredicted RBP19.27■□□□□ 0.67
LETMD1-212ENST00000547877 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.67
LETMD1-212ENST00000547877 PRIM1P49642 420 aaKnown RBP19.26■□□□□ 0.67
LETMD1-212ENST00000547877 ACSBG1Q96GR2 724 aa19.26■□□□□ 0.67
LETMD1-212ENST00000547877 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
LETMD1-212ENST00000547877 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
LETMD1-212ENST00000547877 PIGBQ92521 554 aa19.25■□□□□ 0.67
LETMD1-212ENST00000547877 BCL9O00512 1426 aa19.24■□□□□ 0.67
LETMD1-212ENST00000547877 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
LETMD1-212ENST00000547877 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
LETMD1-212ENST00000547877 KCNQ3O43525 872 aa19.24■□□□□ 0.67
LETMD1-212ENST00000547877 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
LETMD1-212ENST00000547877 KCNQ2O43526 872 aa19.22■□□□□ 0.67
LETMD1-212ENST00000547877 KRT24Q2M2I5 525 aa19.22■□□□□ 0.67
LETMD1-212ENST00000547877 C8orf58Q8NAV2 365 aa19.21■□□□□ 0.67
LETMD1-212ENST00000547877 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
LETMD1-212ENST00000547877 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
LETMD1-212ENST00000547877 TTC5Q8N0Z6 440 aa19.2■□□□□ 0.66
LETMD1-212ENST00000547877 TSPYL6Q8N831 410 aa19.2■□□□□ 0.66
LETMD1-212ENST00000547877 PAPPAQ13219 1627 aa19.2■□□□□ 0.66
LETMD1-212ENST00000547877 FAM196AQ6ZSG2 479 aa19.2■□□□□ 0.66
LETMD1-212ENST00000547877 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
LETMD1-212ENST00000547877 SBF2Q86WG5 1849 aa19.19■□□□□ 0.66
LETMD1-212ENST00000547877 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
LETMD1-212ENST00000547877 TWISTNBQ3B726 338 aaPredicted RBP19.18■□□□□ 0.66
LETMD1-212ENST00000547877 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
LETMD1-212ENST00000547877 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
LETMD1-212ENST00000547877 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
LETMD1-212ENST00000547877 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
LETMD1-212ENST00000547877 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
LETMD1-212ENST00000547877 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
LETMD1-212ENST00000547877 KCPQ6ZWJ8 1503 aa19.16■□□□□ 0.66
LETMD1-212ENST00000547877 VAMP4O75379 141 aa19.16■□□□□ 0.66
LETMD1-212ENST00000547877 RCAN3Q9UKA8 241 aa19.16■□□□□ 0.66
LETMD1-212ENST00000547877 PTCD1O75127 700 aaKnown RBP19.15■□□□□ 0.66
LETMD1-212ENST00000547877 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
LETMD1-212ENST00000547877 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
LETMD1-212ENST00000547877 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
LETMD1-212ENST00000547877 BTAF1O14981 1849 aa19.14■□□□□ 0.65
LETMD1-212ENST00000547877 BCL11BQ9C0K0 894 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-212ENST00000547877 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
LETMD1-212ENST00000547877 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-212ENST00000547877 TRIM37O94972 964 aa19.12■□□□□ 0.65
LETMD1-212ENST00000547877 HOXB7P09629 217 aa19.12■□□□□ 0.65
LETMD1-212ENST00000547877 RARSP54136 660 aaKnown RBP19.12■□□□□ 0.65
LETMD1-212ENST00000547877 ZNF428Q96B54 188 aa19.12■□□□□ 0.65
LETMD1-212ENST00000547877 RBM42Q9BTD8 480 aaKnown RBP19.12■□□□□ 0.65
LETMD1-212ENST00000547877 PALLDQ8WX93 1383 aa19.11■□□□□ 0.65
LETMD1-212ENST00000547877 SNRPA1P09661 255 aaKnown RBP19.11■□□□□ 0.65
LETMD1-212ENST00000547877 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
LETMD1-212ENST00000547877 C5P01031 1676 aa19.11■□□□□ 0.65
LETMD1-212ENST00000547877 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
LETMD1-212ENST00000547877 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
LETMD1-212ENST00000547877 BCAR3O75815 825 aa19.09■□□□□ 0.65
LETMD1-212ENST00000547877 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
LETMD1-212ENST00000547877 HDGFL1Q5TGJ6 251 aa19.09■□□□□ 0.65
LETMD1-212ENST00000547877 NECTIN2Q92692 538 aa19.09■□□□□ 0.65
LETMD1-212ENST00000547877 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
LETMD1-212ENST00000547877 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.65
LETMD1-212ENST00000547877 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.65
LETMD1-212ENST00000547877 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.65
LETMD1-212ENST00000547877 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
LETMD1-212ENST00000547877 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
LETMD1-212ENST00000547877 LOC102724428A0A0B4J2F2 783 aa19.07■□□□□ 0.64
LETMD1-212ENST00000547877 SIK1P57059 783 aa19.07■□□□□ 0.64
LETMD1-212ENST00000547877 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
LETMD1-212ENST00000547877 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
LETMD1-212ENST00000547877 LAMB4A4D0S4 1761 aa19.06■□□□□ 0.64
LETMD1-212ENST00000547877 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
LETMD1-212ENST00000547877 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
LETMD1-212ENST00000547877 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
LETMD1-212ENST00000547877 STK31Q9BXU1 1019 aa19.05■□□□□ 0.64
LETMD1-212ENST00000547877 TEX13AQ9BXU3 409 aaPredicted RBP19.04■□□□□ 0.64
LETMD1-212ENST00000547877 TJP1Q07157 1748 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1397.4 ms