RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
CHMP1A-204ENST00000547687 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
CHMP1A-204ENST00000547687 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
CHMP1A-204ENST00000547687 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
CHMP1A-204ENST00000547687 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
CHMP1A-204ENST00000547687 MYH16Q9H6N6 1097 aa21.31■■□□□ 1
CHMP1A-204ENST00000547687 PROM2Q8N271 834 aa21.31■■□□□ 1
CHMP1A-204ENST00000547687 KDRP35968 1356 aa21.3■■□□□ 1
CHMP1A-204ENST00000547687 PLSCR1O15162 318 aa21.29■■□□□ 1
CHMP1A-204ENST00000547687 PKD1L3Q7Z443 1732 aa21.29■■□□□ 1
CHMP1A-204ENST00000547687 PRIM1P49642 420 aaKnown RBP21.28■■□□□ 1
CHMP1A-204ENST00000547687 NCAPD2Q15021 1401 aa21.27■■□□□ 1
CHMP1A-204ENST00000547687 IL16Q14005 1332 aa21.27■□□□□ 0.99
CHMP1A-204ENST00000547687 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 CYP27B1O15528 508 aa21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-204ENST00000547687 PDE3AQ14432 1141 aa21.25■□□□□ 0.99
CHMP1A-204ENST00000547687 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
CHMP1A-204ENST00000547687 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
CHMP1A-204ENST00000547687 PCDH11XQ9BZA7 1347 aa21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 PCDH11YQ9BZA8 1340 aa21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 ITGB4P16144 1822 aa21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 TCERG1O14776 1098 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
CHMP1A-204ENST00000547687 NBPF14Q5TI25 921 aa21.23■□□□□ 0.99
CHMP1A-204ENST00000547687 KCNQ4P56696 695 aa21.22■□□□□ 0.99
CHMP1A-204ENST00000547687 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
CHMP1A-204ENST00000547687 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
CHMP1A-204ENST00000547687 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
CHMP1A-204ENST00000547687 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
CHMP1A-204ENST00000547687 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-204ENST00000547687 FRAT1Q92837 279 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-204ENST00000547687 PDGFDQ9GZP0 370 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-204ENST00000547687 LAS1LQ9Y4W2 734 aaKnown RBP21.2■□□□□ 0.98
CHMP1A-204ENST00000547687 CT47B1P0C2W7 299 aaPredicted RBP21.19■□□□□ 0.98
CHMP1A-204ENST00000547687 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
CHMP1A-204ENST00000547687 LRRC4BQ9NT99 713 aa21.19■□□□□ 0.98
CHMP1A-204ENST00000547687 SPG7Q9UQ90 795 aa21.19■□□□□ 0.98
CHMP1A-204ENST00000547687 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
CHMP1A-204ENST00000547687 LY75O60449 1722 aa21.17■□□□□ 0.98
CHMP1A-204ENST00000547687 MCM10Q7L590 875 aa21.17■□□□□ 0.98
CHMP1A-204ENST00000547687 GAS2L2Q8NHY3 880 aa21.17■□□□□ 0.98
CHMP1A-204ENST00000547687 PANK1Q8TE04 598 aa21.17■□□□□ 0.98
CHMP1A-204ENST00000547687 MS4A1P11836 297 aa21.16■□□□□ 0.98
CHMP1A-204ENST00000547687 IFT57Q9NWB7 429 aa21.16■□□□□ 0.98
CHMP1A-204ENST00000547687 ZNF853P0CG23 659 aa21.16■□□□□ 0.98
CHMP1A-204ENST00000547687 GNAI1P63096 354 aa21.16■□□□□ 0.98
CHMP1A-204ENST00000547687 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
CHMP1A-204ENST00000547687 LRP5O75197 1615 aa21.15■□□□□ 0.98
CHMP1A-204ENST00000547687 COG6Q9Y2V7 657 aa21.15■□□□□ 0.98
CHMP1A-204ENST00000547687 PAPPAQ13219 1627 aa21.15■□□□□ 0.98
CHMP1A-204ENST00000547687 PHKG2P15735 406 aa21.14■□□□□ 0.98
CHMP1A-204ENST00000547687 CFAP44Q96MT7 982 aa21.14■□□□□ 0.98
CHMP1A-204ENST00000547687 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
CHMP1A-204ENST00000547687 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
CHMP1A-204ENST00000547687 CASZ1Q86V15 1759 aa21.13■□□□□ 0.97
CHMP1A-204ENST00000547687 ZNF827Q17R98 1081 aa21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 SLC15A2Q16348 729 aa21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHMP1A-204ENST00000547687 NKX1-1Q15270 411 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-204ENST00000547687 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-204ENST00000547687 PIGBQ92521 554 aa21.11■□□□□ 0.97
CHMP1A-204ENST00000547687 GNAT3A8MTJ3 354 aa21.1■□□□□ 0.97
CHMP1A-204ENST00000547687 CLUAP1Q96AJ1 413 aa21.1■□□□□ 0.97
CHMP1A-204ENST00000547687 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
CHMP1A-204ENST00000547687 AAMPQ13685 434 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 CCNL1Q9UK58 526 aaPredicted RBP21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 ZBTB7AO95365 584 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 RLBP1P12271 317 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 PDE4AP27815 886 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 ZKSCAN2Q63HK3 967 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 TNNQ9UQP3 1299 aa21.09■□□□□ 0.97
CHMP1A-204ENST00000547687 MSH5O43196 834 aa21.08■□□□□ 0.97
CHMP1A-204ENST00000547687 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.96
CHMP1A-204ENST00000547687 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
CHMP1A-204ENST00000547687 MAP3K5Q99683 1374 aa21.08■□□□□ 0.96
CHMP1A-204ENST00000547687 C5P01031 1676 aa21.07■□□□□ 0.96
CHMP1A-204ENST00000547687 CHL1O00533 1208 aa21.07■□□□□ 0.96
CHMP1A-204ENST00000547687 SLC27A3Q5K4L6 730 aa21.07■□□□□ 0.96
CHMP1A-204ENST00000547687 SSH1Q8WYL5 1049 aa21.07■□□□□ 0.96
CHMP1A-204ENST00000547687 UTRNP46939 3433 aa21.07■□□□□ 0.96
CHMP1A-204ENST00000547687 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
CHMP1A-204ENST00000547687 TMOD3Q9NYL9 352 aa21.06■□□□□ 0.96
CHMP1A-204ENST00000547687 KDM6AO15550 1401 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-204ENST00000547687 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 ASAP1Q9ULH1 1129 aa21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 ELL2O00472 640 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 IGHDP01880 384 aa21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms