RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 MRC1P22897 1456 aa27.15■■□□□ 1.94
C12orf49-203ENST00000547630 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
C12orf49-203ENST00000547630 HTATSF1O43719 755 aaKnown RBP27.14■■□□□ 1.94
C12orf49-203ENST00000547630 DCTN1Q14203 1278 aa27.14■■□□□ 1.94
C12orf49-203ENST00000547630 MCM10Q7L590 875 aa27.14■■□□□ 1.94
C12orf49-203ENST00000547630 LY75O60449 1722 aa27.14■■□□□ 1.94
C12orf49-203ENST00000547630 TMPOP42166 694 aaKnown RBP27.13■■□□□ 1.93
C12orf49-203ENST00000547630 TEFQ10587 303 aa27.13■■□□□ 1.93
C12orf49-203ENST00000547630 CEMIPQ8WUJ3 1361 aa27.13■■□□□ 1.93
C12orf49-203ENST00000547630 KCNQ4P56696 695 aa27.12■■□□□ 1.93
C12orf49-203ENST00000547630 LRRC4BQ9NT99 713 aa27.12■■□□□ 1.93
C12orf49-203ENST00000547630 RRP7AQ9Y3A4 280 aaKnown RBP27.12■■□□□ 1.93
C12orf49-203ENST00000547630 RIPK4P57078 832 aa27.11■■□□□ 1.93
C12orf49-203ENST00000547630 SLC27A3Q5K4L6 730 aa27.11■■□□□ 1.93
C12orf49-203ENST00000547630 CCNL1Q9UK58 526 aaPredicted RBP27.11■■□□□ 1.93
C12orf49-203ENST00000547630 NEUROD2Q15784 382 aa27.09■■□□□ 1.93
C12orf49-203ENST00000547630 SLC39A6Q13433 755 aa27.08■■□□□ 1.93
C12orf49-203ENST00000547630 NBPF14Q5TI25 921 aa27.08■■□□□ 1.93
C12orf49-203ENST00000547630 FAM9BQ8IZU0 186 aa27.08■■□□□ 1.93
C12orf49-203ENST00000547630 LOC102724428A0A0B4J2F2 783 aa27.07■■□□□ 1.92
C12orf49-203ENST00000547630 APAF1O14727 1248 aa27.07■■□□□ 1.92
C12orf49-203ENST00000547630 SIK1P57059 783 aa27.07■■□□□ 1.92
C12orf49-203ENST00000547630 RBM42Q9BTD8 480 aaKnown RBP27.07■■□□□ 1.92
C12orf49-203ENST00000547630 SIPA1L3O60292 1781 aaPredicted RBP27.06■■□□□ 1.92
C12orf49-203ENST00000547630 CCER2I3L3R5 266 aa27.06■■□□□ 1.92
C12orf49-203ENST00000547630 MIER1Q8N108 512 aa27.06■■□□□ 1.92
C12orf49-203ENST00000547630 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
C12orf49-203ENST00000547630 ANO8Q9HCE9 1232 aaPredicted RBP27.06■■□□□ 1.92
C12orf49-203ENST00000547630 PTCD1O75127 700 aaKnown RBP27.05■■□□□ 1.92
C12orf49-203ENST00000547630 PAPPAQ13219 1627 aa27.04■■□□□ 1.92
C12orf49-203ENST00000547630 ATP6V1AP38606 617 aa27.03■■□□□ 1.92
C12orf49-203ENST00000547630 LMOD3Q0VAK6 560 aa27.03■■□□□ 1.92
C12orf49-203ENST00000547630 PSDA5PKW4 1024 aaPredicted RBP27.02■■□□□ 1.92
C12orf49-203ENST00000547630 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
C12orf49-203ENST00000547630 R3HDM1Q15032 1099 aaKnown RBP27.02■■□□□ 1.92
C12orf49-203ENST00000547630 SLC4A9Q96Q91 983 aa27.02■■□□□ 1.92
C12orf49-203ENST00000547630 STK32BQ9NY57 414 aa27.02■■□□□ 1.92
C12orf49-203ENST00000547630 TRIM35Q9UPQ4 493 aa27.01■■□□□ 1.91
C12orf49-203ENST00000547630 SENP3-EIF4A1A0A087X0R7 540 aa27■■□□□ 1.91
C12orf49-203ENST00000547630 TAF7Q15545 349 aaPredicted RBP27■■□□□ 1.91
C12orf49-203ENST00000547630 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
C12orf49-203ENST00000547630 ITPK1Q13572 414 aa26.99■■□□□ 1.91
C12orf49-203ENST00000547630 SLC15A2Q16348 729 aa26.99■■□□□ 1.91
C12orf49-203ENST00000547630 ZNF790Q6PG37 636 aa26.99■■□□□ 1.91
C12orf49-203ENST00000547630 C5P01031 1676 aa26.99■■□□□ 1.91
C12orf49-203ENST00000547630 TAF1LQ8IZX4 1826 aa26.99■■□□□ 1.91
C12orf49-203ENST00000547630 ZNF827Q17R98 1081 aa26.98■■□□□ 1.91
C12orf49-203ENST00000547630 KCPQ6ZWJ8 1503 aa26.98■■□□□ 1.91
C12orf49-203ENST00000547630 KCNQ3O43525 872 aa26.97■■□□□ 1.91
C12orf49-203ENST00000547630 AKT1S1Q96B36 256 aa26.97■■□□□ 1.91
C12orf49-203ENST00000547630 LINC00116Q8NCU8 138 aa26.97■■□□□ 1.91
C12orf49-203ENST00000547630 MIS18AQ9NYP9 233 aa26.97■■□□□ 1.91
C12orf49-203ENST00000547630 ZNF831Q5JPB2 1677 aa26.96■■□□□ 1.91
C12orf49-203ENST00000547630 UBR2Q8IWV8 1755 aa26.95■■□□□ 1.9
C12orf49-203ENST00000547630 HMGB2P26583 209 aaKnown RBP26.95■■□□□ 1.9
C12orf49-203ENST00000547630 ZNF496Q96IT1 587 aaPredicted RBP26.94■■□□□ 1.9
C12orf49-203ENST00000547630 C4BP0C0L5 1744 aa26.93■■□□□ 1.9
C12orf49-203ENST00000547630 TJP1Q07157 1748 aa26.91■■□□□ 1.9
C12orf49-203ENST00000547630 DNAJC10Q8IXB1 793 aa26.91■■□□□ 1.9
C12orf49-203ENST00000547630 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
C12orf49-203ENST00000547630 TFCP2L1Q9NZI6 479 aa26.91■■□□□ 1.9
C12orf49-203ENST00000547630 VSIG10Q8N0Z9 540 aa26.9■■□□□ 1.9
C12orf49-203ENST00000547630 AK7Q96M32 723 aa26.9■■□□□ 1.9
C12orf49-203ENST00000547630 HEG1Q9ULI3 1381 aa26.9■■□□□ 1.9
C12orf49-203ENST00000547630 COL5A3P25940 1745 aaPredicted RBP26.89■■□□□ 1.9
C12orf49-203ENST00000547630 TSPYL4Q9UJ04 414 aa26.89■■□□□ 1.9
C12orf49-203ENST00000547630 SALL2Q9Y467 1007 aaPredicted RBP26.89■■□□□ 1.9
C12orf49-203ENST00000547630 KDM3BQ7LBC6 1761 aa26.89■■□□□ 1.9
C12orf49-203ENST00000547630 CICQ96RK0 1608 aaPredicted RBP26.88■■□□□ 1.89
C12orf49-203ENST00000547630 LAS1LQ9Y4W2 734 aaKnown RBP26.88■■□□□ 1.89
C12orf49-203ENST00000547630 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
C12orf49-203ENST00000547630 PDGFDQ9GZP0 370 aaPredicted RBP26.86■■□□□ 1.89
C12orf49-203ENST00000547630 PNPLA7Q6ZV29 1317 aa26.86■■□□□ 1.89
C12orf49-203ENST00000547630 CRKLP46109 303 aaKnown RBP26.85■■□□□ 1.89
C12orf49-203ENST00000547630 CCDC27Q2M243 656 aa26.85■■□□□ 1.89
C12orf49-203ENST00000547630 RC3H1Q5TC82 1133 aaKnown RBP26.85■■□□□ 1.89
C12orf49-203ENST00000547630 BABAM1Q9NWV8 329 aa26.85■■□□□ 1.89
C12orf49-203ENST00000547630 CNTNAP4Q9C0A0 1308 aa26.85■■□□□ 1.89
C12orf49-203ENST00000547630 GNPATO15228 680 aa26.84■■□□□ 1.89
C12orf49-203ENST00000547630 CYP19A1P11511 503 aaPredicted RBP26.84■■□□□ 1.89
C12orf49-203ENST00000547630 NCBP3Q53F19 620 aaKnown RBP26.84■■□□□ 1.89
C12orf49-203ENST00000547630 SMIM5Q71RC9 77 aa26.84■■□□□ 1.89
C12orf49-203ENST00000547630 QSER1Q2KHR3 1735 aa26.84■■□□□ 1.89
C12orf49-203ENST00000547630 EIF4A1P60842 406 aaKnown RBP26.84■■□□□ 1.89
C12orf49-203ENST00000547630 CALD1Q05682 793 aaKnown RBP26.84■■□□□ 1.89
C12orf49-203ENST00000547630 AMIGO3Q86WK7 504 aa26.84■■□□□ 1.89
C12orf49-203ENST00000547630 WWC1Q8IX03 1113 aa26.84■■□□□ 1.89
C12orf49-203ENST00000547630 PRAMEF22A3QJZ6 481 aa26.83■■□□□ 1.88
C12orf49-203ENST00000547630 CHL1O00533 1208 aa26.83■■□□□ 1.88
C12orf49-203ENST00000547630 PHF14O94880 888 aa26.83■■□□□ 1.88
C12orf49-203ENST00000547630 TEX13AQ9BXU3 409 aaPredicted RBP26.83■■□□□ 1.88
C12orf49-203ENST00000547630 MYH14Q7Z406 1995 aaKnown RBP26.82■■□□□ 1.88
C12orf49-203ENST00000547630 UBR3Q6ZT12 1888 aa26.82■■□□□ 1.88
C12orf49-203ENST00000547630 CASZ1Q86V15 1759 aa26.82■■□□□ 1.88
C12orf49-203ENST00000547630 SNRPA1P09661 255 aaKnown RBP26.82■■□□□ 1.88
C12orf49-203ENST00000547630 CFAP44Q96MT7 982 aa26.82■■□□□ 1.88
C12orf49-203ENST00000547630 MSH5O43196 834 aa26.81■■□□□ 1.88
C12orf49-203ENST00000547630 STARD3NLO95772 234 aa26.81■■□□□ 1.88
C12orf49-203ENST00000547630 INTS5Q6P9B9 1019 aaKnown RBP26.81■■□□□ 1.88
C12orf49-203ENST00000547630 COL23A1Q86Y22 540 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms