RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 PHACTR3Q96KR7 559 aa32.06■■■□□ 2.72
RBFOX1-209ENST00000547427 CASZ1Q86V15 1759 aa32.06■■■□□ 2.72
RBFOX1-209ENST00000547427 GNAT3A8MTJ3 354 aa32.05■■■□□ 2.72
RBFOX1-209ENST00000547427 MAP3K5Q99683 1374 aa32.05■■■□□ 2.72
RBFOX1-209ENST00000547427 PRKRIP1Q9H875 184 aaPredicted RBP32.04■■■□□ 2.72
RBFOX1-209ENST00000547427 RBM42Q9BTD8 480 aaKnown RBP32.03■■■□□ 2.72
RBFOX1-209ENST00000547427 PDGFDQ9GZP0 370 aaPredicted RBP32.03■■■□□ 2.72
RBFOX1-209ENST00000547427 SLC52A2Q9HAB3 445 aa32.03■■■□□ 2.72
RBFOX1-209ENST00000547427 ATP6V1AP38606 617 aa32.02■■■□□ 2.72
RBFOX1-209ENST00000547427 SPON1Q9HCB6 807 aa32.02■■■□□ 2.72
RBFOX1-209ENST00000547427 QSER1Q2KHR3 1735 aa32.01■■■□□ 2.72
RBFOX1-209ENST00000547427 TUBGCP6Q96RT7 1819 aa32■■■□□ 2.71
RBFOX1-209ENST00000547427 PNNQ9H307 717 aaKnown RBP32■■■□□ 2.71
RBFOX1-209ENST00000547427 ADAMTS7Q9UKP4 1686 aa31.99■■■□□ 2.71
RBFOX1-209ENST00000547427 ZBTB7AO95365 584 aa31.99■■■□□ 2.71
RBFOX1-209ENST00000547427 C4BP0C0L5 1744 aa31.98■■■□□ 2.71
RBFOX1-209ENST00000547427 AK7Q96M32 723 aa31.97■■■□□ 2.71
RBFOX1-209ENST00000547427 MRC1P22897 1456 aa31.97■■■□□ 2.71
RBFOX1-209ENST00000547427 PTCD1O75127 700 aaKnown RBP31.96■■■□□ 2.71
RBFOX1-209ENST00000547427 TEFQ10587 303 aa31.96■■■□□ 2.71
RBFOX1-209ENST00000547427 PNPLA7Q6ZV29 1317 aa31.96■■■□□ 2.71
RBFOX1-209ENST00000547427 MSH5O43196 834 aa31.95■■■□□ 2.71
RBFOX1-209ENST00000547427 RTF1Q92541 710 aaKnown RBP31.95■■■□□ 2.71
RBFOX1-209ENST00000547427 ITPK1Q13572 414 aa31.94■■■□□ 2.7
RBFOX1-209ENST00000547427 IL17REQ8NFR9 667 aa31.94■■■□□ 2.7
RBFOX1-209ENST00000547427 ATF5Q9Y2D1 282 aaPredicted RBP31.94■■■□□ 2.7
RBFOX1-209ENST00000547427 LINC00116Q8NCU8 138 aa31.93■■■□□ 2.7
RBFOX1-209ENST00000547427 MTFR1LQ9H019 292 aa31.93■■■□□ 2.7
RBFOX1-209ENST00000547427 PPP1R1BQ9UD71 204 aaPredicted RBP31.93■■■□□ 2.7
RBFOX1-209ENST00000547427 MAPK8IP3Q9UPT6 1336 aa31.93■■■□□ 2.7
RBFOX1-209ENST00000547427 ZNF831Q5JPB2 1677 aa31.92■■■□□ 2.7
RBFOX1-209ENST00000547427 SRCAPQ6ZRS2 3230 aa31.92■■■□□ 2.7
RBFOX1-209ENST00000547427 WDR43Q15061 677 aaKnown RBP eCLIP31.91■■■□□ 2.7
RBFOX1-209ENST00000547427 SLC39A6Q13433 755 aa31.9■■■□□ 2.7
RBFOX1-209ENST00000547427 SLC4A9Q96Q91 983 aa31.9■■■□□ 2.7
RBFOX1-209ENST00000547427 FLAD1Q8NFF5 587 aa31.89■■■□□ 2.7
RBFOX1-209ENST00000547427 SLC16A10Q8TF71 515 aa31.89■■■□□ 2.7
RBFOX1-209ENST00000547427 PLEKHF1Q96S99 279 aa31.89■■■□□ 2.7
RBFOX1-209ENST00000547427 DLG5Q8TDM6 1919 aa31.88■■■□□ 2.69
RBFOX1-209ENST00000547427 UBR3Q6ZT12 1888 aa31.88■■■□□ 2.69
RBFOX1-209ENST00000547427 SIPA1L3O60292 1781 aaPredicted RBP31.87■■■□□ 2.69
RBFOX1-209ENST00000547427 TTC5Q8N0Z6 440 aa31.87■■■□□ 2.69
RBFOX1-209ENST00000547427 CEMIPQ8WUJ3 1361 aa31.86■■■□□ 2.69
RBFOX1-209ENST00000547427 PHF14O94880 888 aa31.86■■■□□ 2.69
RBFOX1-209ENST00000547427 MCM10Q7L590 875 aa31.86■■■□□ 2.69
RBFOX1-209ENST00000547427 COL23A1Q86Y22 540 aaPredicted RBP31.86■■■□□ 2.69
RBFOX1-209ENST00000547427 COL5A3P25940 1745 aaPredicted RBP31.86■■■□□ 2.69
RBFOX1-209ENST00000547427 GNPATO15228 680 aa31.85■■■□□ 2.69
RBFOX1-209ENST00000547427 HTATSF1O43719 755 aaKnown RBP31.85■■■□□ 2.69
RBFOX1-209ENST00000547427 ANP32CO43423 234 aa31.84■■■□□ 2.69
RBFOX1-209ENST00000547427 NFE2L2Q16236 605 aa31.83■■■□□ 2.69
RBFOX1-209ENST00000547427 DCTN1Q14203 1278 aa31.82■■■□□ 2.68
RBFOX1-209ENST00000547427 TJP1Q07157 1748 aa31.81■■■□□ 2.68
RBFOX1-209ENST00000547427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.81■■■□□ 2.68
RBFOX1-209ENST00000547427 SSFA2P28290 1259 aa31.81■■■□□ 2.68
RBFOX1-209ENST00000547427 PTGER2P43116 358 aa31.81■■■□□ 2.68
RBFOX1-209ENST00000547427 BTBD11A6QL63 1104 aa31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 RC3H1Q5TC82 1133 aaKnown RBP31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 SMIM5Q71RC9 77 aa31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 RTCBQ9Y3I0 505 aaKnown RBP31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 UBR2Q8IWV8 1755 aa31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 KCPQ6ZWJ8 1503 aa31.8■■■□□ 2.68
RBFOX1-209ENST00000547427 CNTNAP4Q9C0A0 1308 aa31.79■■■□□ 2.68
RBFOX1-209ENST00000547427 ZNF790Q6PG37 636 aa31.79■■■□□ 2.68
RBFOX1-209ENST00000547427 CICQ96RK0 1608 aaPredicted RBP31.78■■■□□ 2.68
RBFOX1-209ENST00000547427 POLD1P28340 1107 aa31.78■■■□□ 2.68
RBFOX1-209ENST00000547427 AMIGO3Q86WK7 504 aa31.78■■■□□ 2.68
RBFOX1-209ENST00000547427 CCDC146Q8IYE0 955 aa31.78■■■□□ 2.68
RBFOX1-209ENST00000547427 CRKLP46109 303 aaKnown RBP31.77■■■□□ 2.68
RBFOX1-209ENST00000547427 DNAJC10Q8IXB1 793 aa31.77■■■□□ 2.68
RBFOX1-209ENST00000547427 ADAMTS8Q9UP79 889 aa31.77■■■□□ 2.68
RBFOX1-209ENST00000547427 MYH14Q7Z406 1995 aaKnown RBP31.77■■■□□ 2.68
RBFOX1-209ENST00000547427 VSIG10Q8N0Z9 540 aa31.75■■■□□ 2.67
RBFOX1-209ENST00000547427 SGIP1Q9BQI5 828 aa31.75■■■□□ 2.67
RBFOX1-209ENST00000547427 RIPK4P57078 832 aa31.74■■■□□ 2.67
RBFOX1-209ENST00000547427 TRAPPC3LQ5T215 181 aa31.74■■■□□ 2.67
RBFOX1-209ENST00000547427 MSL1Q68DK7 614 aa31.74■■■□□ 2.67
RBFOX1-209ENST00000547427 RUNDC1Q96C34 613 aa31.74■■■□□ 2.67
RBFOX1-209ENST00000547427 RPS6KA4O75676 772 aa31.73■■■□□ 2.67
RBFOX1-209ENST00000547427 ZNF496Q96IT1 587 aaPredicted RBP31.73■■■□□ 2.67
RBFOX1-209ENST00000547427 FMNL2Q96PY5 1086 aa31.73■■■□□ 2.67
RBFOX1-209ENST00000547427 ARXQ96QS3 562 aa31.73■■■□□ 2.67
RBFOX1-209ENST00000547427 TAF7Q15545 349 aaPredicted RBP31.72■■■□□ 2.67
RBFOX1-209ENST00000547427 COL24A1Q17RW2 1714 aa31.72■■■□□ 2.67
RBFOX1-209ENST00000547427 TMPOP42166 694 aaKnown RBP31.71■■■□□ 2.67
RBFOX1-209ENST00000547427 HEG1Q9ULI3 1381 aa31.7■■■□□ 2.67
RBFOX1-209ENST00000547427 NEUROD2Q15784 382 aa31.7■■■□□ 2.67
RBFOX1-209ENST00000547427 CCDC87Q9NVE4 849 aa31.7■■■□□ 2.67
RBFOX1-209ENST00000547427 KCNQ3O43525 872 aa31.69■■■□□ 2.66
RBFOX1-209ENST00000547427 CYP19A1P11511 503 aaPredicted RBP31.69■■■□□ 2.66
RBFOX1-209ENST00000547427 ADRA2BP18089 450 aa31.69■■■□□ 2.66
RBFOX1-209ENST00000547427 LMOD3Q0VAK6 560 aa31.69■■■□□ 2.66
RBFOX1-209ENST00000547427 RRP7AQ9Y3A4 280 aaKnown RBP31.69■■■□□ 2.66
RBFOX1-209ENST00000547427 STARD3NLO95772 234 aa31.68■■■□□ 2.66
RBFOX1-209ENST00000547427 RFC4P35249 363 aa31.68■■■□□ 2.66
RBFOX1-209ENST00000547427 THUMPD2Q9BTF0 503 aaKnown RBP31.68■■■□□ 2.66
RBFOX1-209ENST00000547427 TEX13AQ9BXU3 409 aaPredicted RBP31.68■■■□□ 2.66
RBFOX1-209ENST00000547427 INTS5Q6P9B9 1019 aaKnown RBP31.67■■■□□ 2.66
RBFOX1-209ENST00000547427 ARHGEF1Q92888 912 aaKnown RBP31.67■■■□□ 2.66
RBFOX1-209ENST00000547427 CCDC184Q52MB2 194 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms