RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.71■□□□□ 0.11
BRF1-210ENST00000547374 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
BRF1-210ENST00000547374 TSPY26PQ9H489 355 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
BRF1-210ENST00000547374 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 ZFYVE9O95405 1425 aa15.71■□□□□ 0.11
BRF1-210ENST00000547374 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.1
BRF1-210ENST00000547374 DEPDC5O75140 1603 aa15.71■□□□□ 0.1
BRF1-210ENST00000547374 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 HCLS1P14317 486 aaPredicted RBP15.7■□□□□ 0.1
BRF1-210ENST00000547374 CHMLP26374 656 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 SMC3Q9UQE7 1217 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 STK3Q13188 491 aa15.7■□□□□ 0.1
BRF1-210ENST00000547374 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
BRF1-210ENST00000547374 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
BRF1-210ENST00000547374 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
BRF1-210ENST00000547374 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
BRF1-210ENST00000547374 IL25Q9H293 177 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 COL3A1P02461 1466 aaPredicted RBP15.69■□□□□ 0.1
BRF1-210ENST00000547374 PTPRCP08575 1304 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 CASTP20810 708 aaKnown RBP15.69■□□□□ 0.1
BRF1-210ENST00000547374 LRSAM1Q6UWE0 723 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 FBXW7Q969H0 707 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 PTPRMP28827 1452 aa15.69■□□□□ 0.1
BRF1-210ENST00000547374 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
BRF1-210ENST00000547374 NECAB1Q8N987 351 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 KIAA2012Q0VF49 1180 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 CAMK4Q16566 473 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 PA2G4Q9UQ80 394 aaKnown RBP15.68■□□□□ 0.1
BRF1-210ENST00000547374 FAM173BQ6P4H8 233 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
BRF1-210ENST00000547374 TEFQ10587 303 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
BRF1-210ENST00000547374 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 GNAT3A8MTJ3 354 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 MBD3O95983 291 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
BRF1-210ENST00000547374 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 ABCA9Q8IUA7 1624 aa15.67■□□□□ 0.1
BRF1-210ENST00000547374 FGD1P98174 961 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 JAKMIP1Q96N16 626 aaKnown RBP15.66■□□□□ 0.1
BRF1-210ENST00000547374 SRCIN1Q9C0H9 1055 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 MLH3Q9UHC1 1453 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 NCOA3Q9Y6Q9 1424 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 ZNF445P59923 1031 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 CEBPZQ03701 1054 aaKnown RBP15.66■□□□□ 0.1
BRF1-210ENST00000547374 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
BRF1-210ENST00000547374 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
BRF1-210ENST00000547374 TPM2P07951 284 aa15.65■□□□□ 0.1
BRF1-210ENST00000547374 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
BRF1-210ENST00000547374 KCNQ3O43525 872 aa15.65■□□□□ 0.1
BRF1-210ENST00000547374 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
BRF1-210ENST00000547374 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
BRF1-210ENST00000547374 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
BRF1-210ENST00000547374 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
BRF1-210ENST00000547374 PPLO60437 1756 aa15.64■□□□□ 0.1
BRF1-210ENST00000547374 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
BRF1-210ENST00000547374 CHPF2Q9P2E5 772 aa15.64■□□□□ 0.09
BRF1-210ENST00000547374 CCDC39Q9UFE4 941 aa15.64■□□□□ 0.09
BRF1-210ENST00000547374 EID1Q9Y6B2 187 aa15.64■□□□□ 0.09
BRF1-210ENST00000547374 OFD1O75665 1012 aa15.64■□□□□ 0.09
BRF1-210ENST00000547374 ZC3H13Q5T200 1668 aaKnown RBP15.64■□□□□ 0.09
BRF1-210ENST00000547374 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
BRF1-210ENST00000547374 ARAP3Q8WWN8 1544 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 USP44Q9H0E7 712 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 TFIP11Q9UBB9 837 aaKnown RBP15.63■□□□□ 0.09
BRF1-210ENST00000547374 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 AK2P54819 239 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 ADGRB2O60241 1585 aa15.63■□□□□ 0.09
BRF1-210ENST00000547374 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
BRF1-210ENST00000547374 ZKSCAN5Q9Y2L8 839 aa15.62■□□□□ 0.09
BRF1-210ENST00000547374 WDR33Q9C0J8 1336 aaKnown RBP15.62■□□□□ 0.09
BRF1-210ENST00000547374 DNM1Q05193 864 aaKnown RBP15.62■□□□□ 0.09
BRF1-210ENST00000547374 IL17REQ8NFR9 667 aa15.62■□□□□ 0.09
BRF1-210ENST00000547374 LRRC59Q96AG4 307 aaKnown RBP15.62■□□□□ 0.09
BRF1-210ENST00000547374 LTKP29376 864 aa15.62■□□□□ 0.09
BRF1-210ENST00000547374 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
BRF1-210ENST00000547374 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
BRF1-210ENST00000547374 ARHGEF40Q8TER5 1519 aa15.61■□□□□ 0.09
BRF1-210ENST00000547374 CKAP2LQ8IYA6 745 aa15.61■□□□□ 0.09
BRF1-210ENST00000547374 CLASRPQ8N2M8 674 aaKnown RBP15.61■□□□□ 0.09
BRF1-210ENST00000547374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
BRF1-210ENST00000547374 ADCY5O95622 1261 aa15.61■□□□□ 0.09
BRF1-210ENST00000547374 CWF19L2Q2TBE0 894 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms