RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ST5P78524 1137 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 USP27XA6NNY8 438 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 KCNG1Q9UIX4 513 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 SHPRHQ149N8 1683 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 ANKRD36BQ8N2N9 1353 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
RBFOX1-208ENST00000547372 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 ZSCAN26Q16670 478 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 ALDH1L2Q3SY69 923 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
RBFOX1-208ENST00000547372 MADDQ8WXG6 1647 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 ZNF518AQ6AHZ1 1483 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 LMAN1P49257 510 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 GPS2Q13227 327 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 GGT6Q6P531 493 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 CLGNO14967 610 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 ERC2O15083 957 aa14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.17□□□□□ -0.14
RBFOX1-208ENST00000547372 VPS37CA5D8V6 355 aaPredicted RBP14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 CASQ1P31415 396 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 ICE2Q659A1 982 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 DIAPH1O60610 1272 aaKnown RBP14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 GEMIN8Q9NWZ8 242 aaKnown RBP14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 CEP152O94986 1710 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 UBE2HP62256 183 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 EXOC6BQ9Y2D4 811 aa14.16□□□□□ -0.14
RBFOX1-208ENST00000547372 SLU7O95391 586 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 MYCBPQ99417 103 aaPredicted RBP14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 PALD1Q9ULE6 856 aa14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 GNL2Q13823 731 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 SYCP1Q15431 976 aa14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
RBFOX1-208ENST00000547372 SKILP12757 684 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 NOP2P46087 812 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 TMCO3Q6UWJ1 677 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 TXLNBQ8N3L3 684 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 ATP10AO60312 1499 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 SEC31AO94979 1220 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 MCM2P49736 904 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 ZRSR1Q15695 479 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 ANO6Q4KMQ2 910 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 FERMT3Q86UX7 667 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 TPM4P67936 248 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 ERO1AQ96HE7 468 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 DEF6Q9H4E7 631 aa14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-208ENST00000547372 IL16Q14005 1332 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 CLCN6P51797 869 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 OS9Q13438 667 aaPredicted RBP14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 JRKLQ9Y4A0 524 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 HAP1P54257 671 aaPredicted RBP14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 SIRT1Q96EB6 747 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
RBFOX1-208ENST00000547372 HMMRO75330 724 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 PNMA6AP0CW24 399 aaPredicted RBP14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 FAM200AQ8TCP9 573 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 UNC13BO14795 1591 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 CCDC144BQ3MJ40 725 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 CCAR2Q8N163 923 aaKnown RBP14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 LRRN4CLQ8ND94 238 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 CARMIL2Q6F5E8 1435 aa14.12□□□□□ -0.15
RBFOX1-208ENST00000547372 PSEN1P49768 467 aa14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 FAM193AP78312 1265 aa14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 FAM173BQ6P4H8 233 aa14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 FAM177A1Q8N128 213 aaPredicted RBP14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 EPC1Q9H2F5 836 aa14.11□□□□□ -0.15
RBFOX1-208ENST00000547372 PTPRTO14522 1441 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms