RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 PHACTR3Q96KR7 559 aa31.29■■■□□ 2.6
SMARCC2-204ENST00000547356 RNMTO43148 476 aaKnown RBP31.28■■■□□ 2.6
SMARCC2-204ENST00000547356 LINC00116Q8NCU8 138 aa31.28■■■□□ 2.6
SMARCC2-204ENST00000547356 SLC4A9Q96Q91 983 aa31.27■■■□□ 2.6
SMARCC2-204ENST00000547356 QSER1Q2KHR3 1735 aa31.27■■■□□ 2.6
SMARCC2-204ENST00000547356 PTGER2P43116 358 aa31.26■■■□□ 2.59
SMARCC2-204ENST00000547356 SMIM5Q71RC9 77 aa31.26■■■□□ 2.59
SMARCC2-204ENST00000547356 RBM42Q9BTD8 480 aaKnown RBP31.26■■■□□ 2.59
SMARCC2-204ENST00000547356 MTFR1LQ9H019 292 aa31.26■■■□□ 2.59
SMARCC2-204ENST00000547356 C4BP0C0L5 1744 aa31.26■■■□□ 2.59
SMARCC2-204ENST00000547356 ATP6V1AP38606 617 aa31.25■■■□□ 2.59
SMARCC2-204ENST00000547356 AMIGO3Q86WK7 504 aa31.25■■■□□ 2.59
SMARCC2-204ENST00000547356 RALBP1Q15311 655 aa31.24■■■□□ 2.59
SMARCC2-204ENST00000547356 SLC52A2Q9HAB3 445 aa31.24■■■□□ 2.59
SMARCC2-204ENST00000547356 PPP1R1BQ9UD71 204 aaPredicted RBP31.24■■■□□ 2.59
SMARCC2-204ENST00000547356 MRC1P22897 1456 aa31.23■■■□□ 2.59
SMARCC2-204ENST00000547356 COL23A1Q86Y22 540 aaPredicted RBP31.23■■■□□ 2.59
SMARCC2-204ENST00000547356 ADAMTS7Q9UKP4 1686 aa31.22■■■□□ 2.59
SMARCC2-204ENST00000547356 MAP3K5Q99683 1374 aa31.22■■■□□ 2.59
SMARCC2-204ENST00000547356 GAS2L2Q8NHY3 880 aa31.22■■■□□ 2.59
SMARCC2-204ENST00000547356 VIRMAQ69YN4 1812 aaKnown RBP31.21■■■□□ 2.59
SMARCC2-204ENST00000547356 MSH5O43196 834 aa31.21■■■□□ 2.59
SMARCC2-204ENST00000547356 PTCD1O75127 700 aaKnown RBP31.21■■■□□ 2.59
SMARCC2-204ENST00000547356 AK7Q96M32 723 aa31.21■■■□□ 2.59
SMARCC2-204ENST00000547356 SGIP1Q9BQI5 828 aa31.2■■■□□ 2.59
SMARCC2-204ENST00000547356 GNAT3A8MTJ3 354 aa31.18■■■□□ 2.58
SMARCC2-204ENST00000547356 FCHSD2O94868 740 aa31.18■■■□□ 2.58
SMARCC2-204ENST00000547356 PHF14O94880 888 aa31.18■■■□□ 2.58
SMARCC2-204ENST00000547356 SLC39A6Q13433 755 aa31.18■■■□□ 2.58
SMARCC2-204ENST00000547356 IL17REQ8NFR9 667 aa31.18■■■□□ 2.58
SMARCC2-204ENST00000547356 MYBBP1AQ9BQG0 1328 aaKnown RBP31.16■■■□□ 2.58
SMARCC2-204ENST00000547356 SLC16A10Q8TF71 515 aa31.15■■■□□ 2.58
SMARCC2-204ENST00000547356 UBR3Q6ZT12 1888 aa31.14■■■□□ 2.58
SMARCC2-204ENST00000547356 GNPATO15228 680 aa31.14■■■□□ 2.58
SMARCC2-204ENST00000547356 MSL1Q68DK7 614 aa31.14■■■□□ 2.58
SMARCC2-204ENST00000547356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.12■■■□□ 2.57
SMARCC2-204ENST00000547356 ZNF831Q5JPB2 1677 aa31.12■■■□□ 2.57
SMARCC2-204ENST00000547356 COL5A3P25940 1745 aaPredicted RBP31.11■■■□□ 2.57
SMARCC2-204ENST00000547356 HMGB2P26583 209 aaKnown RBP31.11■■■□□ 2.57
SMARCC2-204ENST00000547356 TJP1Q07157 1748 aa31.1■■■□□ 2.57
SMARCC2-204ENST00000547356 KCPQ6ZWJ8 1503 aa31.09■■■□□ 2.57
SMARCC2-204ENST00000547356 ZNF316A6NFI3 1004 aaPredicted RBP31.09■■■□□ 2.57
SMARCC2-204ENST00000547356 PRKRIP1Q9H875 184 aaPredicted RBP31.09■■■□□ 2.57
SMARCC2-204ENST00000547356 TEFQ10587 303 aa31.08■■■□□ 2.57
SMARCC2-204ENST00000547356 FLAD1Q8NFF5 587 aa31.08■■■□□ 2.57
SMARCC2-204ENST00000547356 ARXQ96QS3 562 aa31.08■■■□□ 2.57
SMARCC2-204ENST00000547356 PLEKHF1Q96S99 279 aa31.08■■■□□ 2.57
SMARCC2-204ENST00000547356 CEMIPQ8WUJ3 1361 aa31.07■■■□□ 2.56
SMARCC2-204ENST00000547356 SSFA2P28290 1259 aa31.07■■■□□ 2.56
SMARCC2-204ENST00000547356 DCTN1Q14203 1278 aa31.07■■■□□ 2.56
SMARCC2-204ENST00000547356 MCM10Q7L590 875 aa31.07■■■□□ 2.56
SMARCC2-204ENST00000547356 COL24A1Q17RW2 1714 aa31.07■■■□□ 2.56
SMARCC2-204ENST00000547356 DNAJC10Q8IXB1 793 aa31.06■■■□□ 2.56
SMARCC2-204ENST00000547356 FHDC1Q9C0D6 1143 aaPredicted RBP31.06■■■□□ 2.56
SMARCC2-204ENST00000547356 SIPA1L3O60292 1781 aaPredicted RBP31.05■■■□□ 2.56
SMARCC2-204ENST00000547356 CNTNAP4Q9C0A0 1308 aa31.05■■■□□ 2.56
SMARCC2-204ENST00000547356 POLD1P28340 1107 aa31.04■■■□□ 2.56
SMARCC2-204ENST00000547356 MYH14Q7Z406 1995 aaKnown RBP31.03■■■□□ 2.56
SMARCC2-204ENST00000547356 CRKLP46109 303 aaKnown RBP31.03■■■□□ 2.56
SMARCC2-204ENST00000547356 RC3H1Q5TC82 1133 aaKnown RBP31.03■■■□□ 2.56
SMARCC2-204ENST00000547356 CICQ96RK0 1608 aaPredicted RBP31.02■■■□□ 2.56
SMARCC2-204ENST00000547356 RTF1Q92541 710 aaKnown RBP31.02■■■□□ 2.56
SMARCC2-204ENST00000547356 RTCBQ9Y3I0 505 aaKnown RBP31.02■■■□□ 2.56
SMARCC2-204ENST00000547356 UBR2Q8IWV8 1755 aa31.01■■■□□ 2.55
SMARCC2-204ENST00000547356 KCNQ3O43525 872 aa31■■■□□ 2.55
SMARCC2-204ENST00000547356 TTC5Q8N0Z6 440 aa31■■■□□ 2.55
SMARCC2-204ENST00000547356 KLHL34Q8N239 644 aa31■■■□□ 2.55
SMARCC2-204ENST00000547356 RPS6KA4O75676 772 aa30.99■■■□□ 2.55
SMARCC2-204ENST00000547356 NEFMP07197 916 aa30.99■■■□□ 2.55
SMARCC2-204ENST00000547356 ZNF790Q6PG37 636 aa30.99■■■□□ 2.55
SMARCC2-204ENST00000547356 ZNF496Q96IT1 587 aaPredicted RBP30.99■■■□□ 2.55
SMARCC2-204ENST00000547356 SYT17Q9BSW7 474 aa30.99■■■□□ 2.55
SMARCC2-204ENST00000547356 INTS5Q6P9B9 1019 aaKnown RBP30.98■■■□□ 2.55
SMARCC2-204ENST00000547356 BTBD11A6QL63 1104 aa30.97■■■□□ 2.55
SMARCC2-204ENST00000547356 NFE2L2Q16236 605 aa30.97■■■□□ 2.55
SMARCC2-204ENST00000547356 TRAPPC3LQ5T215 181 aa30.97■■■□□ 2.55
SMARCC2-204ENST00000547356 ARHGEF1Q92888 912 aaKnown RBP30.97■■■□□ 2.55
SMARCC2-204ENST00000547356 MAPK8IP3Q9UPT6 1336 aa30.97■■■□□ 2.55
SMARCC2-204ENST00000547356 CYP19A1P11511 503 aaPredicted RBP30.96■■■□□ 2.55
SMARCC2-204ENST00000547356 DLG5Q8TDM6 1919 aa30.96■■■□□ 2.55
SMARCC2-204ENST00000547356 HTATSF1O43719 755 aaKnown RBP30.95■■■□□ 2.55
SMARCC2-204ENST00000547356 THUMPD2Q9BTF0 503 aaKnown RBP30.95■■■□□ 2.55
SMARCC2-204ENST00000547356 CCDC146Q8IYE0 955 aa30.94■■■□□ 2.54
SMARCC2-204ENST00000547356 CCDC87Q9NVE4 849 aa30.94■■■□□ 2.54
SMARCC2-204ENST00000547356 PNNQ9H307 717 aaKnown RBP30.93■■■□□ 2.54
SMARCC2-204ENST00000547356 HEG1Q9ULI3 1381 aa30.92■■■□□ 2.54
SMARCC2-204ENST00000547356 VSIG10Q8N0Z9 540 aa30.92■■■□□ 2.54
SMARCC2-204ENST00000547356 C4AP0C0L4 1744 aa30.92■■■□□ 2.54
SMARCC2-204ENST00000547356 ADRA2BP18089 450 aa30.91■■■□□ 2.54
SMARCC2-204ENST00000547356 WDR43Q15061 677 aaKnown RBP eCLIP30.91■■■□□ 2.54
SMARCC2-204ENST00000547356 ZBTB1Q9Y2K1 713 aa30.91■■■□□ 2.54
SMARCC2-204ENST00000547356 RFC4P35249 363 aa30.9■■■□□ 2.54
SMARCC2-204ENST00000547356 MIS18AQ9NYP9 233 aa30.9■■■□□ 2.54
SMARCC2-204ENST00000547356 SRP68Q9UHB9 627 aaKnown RBP30.9■■■□□ 2.54
SMARCC2-204ENST00000547356 NLGN2Q8NFZ4 835 aa30.89■■■□□ 2.54
SMARCC2-204ENST00000547356 FMNL2Q96PY5 1086 aa30.89■■■□□ 2.54
SMARCC2-204ENST00000547356 ADAMTS8Q9UP79 889 aa30.89■■■□□ 2.54
SMARCC2-204ENST00000547356 RRP7AQ9Y3A4 280 aaKnown RBP30.88■■■□□ 2.53
SMARCC2-204ENST00000547356 SOS1Q07889 1333 aaPredicted RBP30.88■■■□□ 2.53
SMARCC2-204ENST00000547356 GYS1P13807 737 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms