RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
SCAF11-209ENST00000547018 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
SCAF11-209ENST00000547018 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
SCAF11-209ENST00000547018 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
SCAF11-209ENST00000547018 CCDC9Q9Y3X0 531 aaKnown RBP15.78■□□□□ 0.12
SCAF11-209ENST00000547018 UBTFL1P0CB47 393 aaPredicted RBP15.77■□□□□ 0.12
SCAF11-209ENST00000547018 PLEKHM2Q8IWE5 1019 aa15.77■□□□□ 0.12
SCAF11-209ENST00000547018 PROSER3Q2NL68 480 aa15.77■□□□□ 0.11
SCAF11-209ENST00000547018 NUTM1Q86Y26 1132 aa15.77■□□□□ 0.11
SCAF11-209ENST00000547018 AKAP12Q02952 1782 aa15.76■□□□□ 0.11
SCAF11-209ENST00000547018 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
SCAF11-209ENST00000547018 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
SCAF11-209ENST00000547018 TMEM94Q12767 1356 aa15.76■□□□□ 0.11
SCAF11-209ENST00000547018 HMMRO75330 724 aa15.76■□□□□ 0.11
SCAF11-209ENST00000547018 SURF6O75683 361 aaKnown RBP15.76■□□□□ 0.11
SCAF11-209ENST00000547018 ARHGEF25Q86VW2 580 aa15.76■□□□□ 0.11
SCAF11-209ENST00000547018 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
SCAF11-209ENST00000547018 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
SCAF11-209ENST00000547018 NBPF7P0C2Y1 421 aaPredicted RBP15.75■□□□□ 0.11
SCAF11-209ENST00000547018 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
SCAF11-209ENST00000547018 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
SCAF11-209ENST00000547018 PTPRCP08575 1304 aa15.75■□□□□ 0.11
SCAF11-209ENST00000547018 CWF19L2Q2TBE0 894 aaKnown RBP15.74■□□□□ 0.11
SCAF11-209ENST00000547018 TPRNQ4KMQ1 711 aa15.74■□□□□ 0.11
SCAF11-209ENST00000547018 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
SCAF11-209ENST00000547018 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
SCAF11-209ENST00000547018 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
SCAF11-209ENST00000547018 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
SCAF11-209ENST00000547018 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
SCAF11-209ENST00000547018 BMP2KLQ5H9B9 411 aa15.73■□□□□ 0.11
SCAF11-209ENST00000547018 FOXD4L5Q5VV16 416 aaPredicted RBP15.73■□□□□ 0.11
SCAF11-209ENST00000547018 FOXD4L4Q8WXT5 416 aaPredicted RBP15.73■□□□□ 0.11
SCAF11-209ENST00000547018 SDSP20132 328 aa15.73■□□□□ 0.11
SCAF11-209ENST00000547018 SRCIN1Q9C0H9 1055 aa15.73■□□□□ 0.11
SCAF11-209ENST00000547018 KDRP35968 1356 aa15.73■□□□□ 0.11
SCAF11-209ENST00000547018 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
SCAF11-209ENST00000547018 SIL1Q9H173 461 aa15.72■□□□□ 0.11
SCAF11-209ENST00000547018 CDC45O75419 566 aa15.72■□□□□ 0.11
SCAF11-209ENST00000547018 CD2BP2O95400 341 aaKnown RBP15.72■□□□□ 0.11
SCAF11-209ENST00000547018 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
SCAF11-209ENST00000547018 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
SCAF11-209ENST00000547018 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
SCAF11-209ENST00000547018 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SCAF11-209ENST00000547018 PRDM11Q9NQV5 511 aa15.71■□□□□ 0.11
SCAF11-209ENST00000547018 ADGRL3Q9HAR2 1447 aa15.71■□□□□ 0.11
SCAF11-209ENST00000547018 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
SCAF11-209ENST00000547018 DTNBO60941 627 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 PTCD1O75127 700 aaKnown RBP15.7■□□□□ 0.1
SCAF11-209ENST00000547018 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 GNAI3P08754 354 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
SCAF11-209ENST00000547018 ANKARQ7Z5J8 1434 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 AKAP4Q5JQC9 854 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
SCAF11-209ENST00000547018 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-209ENST00000547018 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
SCAF11-209ENST00000547018 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
SCAF11-209ENST00000547018 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
SCAF11-209ENST00000547018 TATP17735 454 aaPredicted RBP15.69■□□□□ 0.1
SCAF11-209ENST00000547018 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
SCAF11-209ENST00000547018 RGS12O14924 1447 aa15.68■□□□□ 0.1
SCAF11-209ENST00000547018 FOXD4L6Q3SYB3 417 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-209ENST00000547018 FOXD4L3Q6VB84 417 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-209ENST00000547018 KLHDC4Q8TBB5 520 aa15.67■□□□□ 0.1
SCAF11-209ENST00000547018 ANO2Q9NQ90 1003 aa15.67■□□□□ 0.1
SCAF11-209ENST00000547018 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
SCAF11-209ENST00000547018 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
SCAF11-209ENST00000547018 PDE1AP54750 535 aa15.67■□□□□ 0.1
SCAF11-209ENST00000547018 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
SCAF11-209ENST00000547018 ZNF335Q9H4Z2 1342 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-209ENST00000547018 CASC1Q6TDU7 716 aa15.66■□□□□ 0.1
SCAF11-209ENST00000547018 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
SCAF11-209ENST00000547018 EVA1CP58658 441 aa15.66■□□□□ 0.1
SCAF11-209ENST00000547018 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
SCAF11-209ENST00000547018 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
SCAF11-209ENST00000547018 ERBB3P21860 1342 aa15.65■□□□□ 0.1
SCAF11-209ENST00000547018 GSE1Q14687 1217 aa15.65■□□□□ 0.1
SCAF11-209ENST00000547018 CADPS2Q86UW7 1296 aa15.65■□□□□ 0.1
SCAF11-209ENST00000547018 UNC5CLQ8IV45 518 aa15.65■□□□□ 0.1
SCAF11-209ENST00000547018 MX1P20591 662 aa15.64■□□□□ 0.09
SCAF11-209ENST00000547018 ZNF496Q96IT1 587 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-209ENST00000547018 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
SCAF11-209ENST00000547018 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
SCAF11-209ENST00000547018 ATP10DQ9P241 1426 aa15.64■□□□□ 0.09
SCAF11-209ENST00000547018 DBF4Q9UBU7 674 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-209ENST00000547018 TOPAZ1Q8N9V7 1692 aa15.64■□□□□ 0.09
SCAF11-209ENST00000547018 GIGYF1O75420 1035 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-209ENST00000547018 ATP8B2P98198 1209 aa15.63■□□□□ 0.09
SCAF11-209ENST00000547018 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-209ENST00000547018 NALCNQ8IZF0 1738 aa15.63■□□□□ 0.09
SCAF11-209ENST00000547018 CABP4P57796 275 aa15.63■□□□□ 0.09
SCAF11-209ENST00000547018 COPS6Q7L5N1 327 aa15.63■□□□□ 0.09
SCAF11-209ENST00000547018 PXDNQ92626 1479 aa15.62■□□□□ 0.09
SCAF11-209ENST00000547018 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
SCAF11-209ENST00000547018 XAGE3Q8WTP9 111 aa15.62■□□□□ 0.09
SCAF11-209ENST00000547018 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-209ENST00000547018 MYD88Q99836 296 aa15.62■□□□□ 0.09
SCAF11-209ENST00000547018 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
SCAF11-209ENST00000547018 SOS1Q07889 1333 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms