RNA–Protein interactions for RNA: ENST00000546911.5

LINC02396-201, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 3

Gene LINC02396, Length 300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-201ENST00000546911 AK7Q96M32 723 aa13.16□□□□□ -0.3
LINC02396-201ENST00000546911 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
LINC02396-201ENST00000546911 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
LINC02396-201ENST00000546911 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
LINC02396-201ENST00000546911 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
LINC02396-201ENST00000546911 POLD1P28340 1107 aa13.15□□□□□ -0.3
LINC02396-201ENST00000546911 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
LINC02396-201ENST00000546911 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
LINC02396-201ENST00000546911 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
LINC02396-201ENST00000546911 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
LINC02396-201ENST00000546911 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
LINC02396-201ENST00000546911 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
LINC02396-201ENST00000546911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
LINC02396-201ENST00000546911 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
LINC02396-201ENST00000546911 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
LINC02396-201ENST00000546911 SSFA2P28290 1259 aa13.13□□□□□ -0.31
LINC02396-201ENST00000546911 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
LINC02396-201ENST00000546911 QSER1Q2KHR3 1735 aa13.11□□□□□ -0.31
LINC02396-201ENST00000546911 PHF14O94880 888 aa13.11□□□□□ -0.31
LINC02396-201ENST00000546911 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
LINC02396-201ENST00000546911 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
LINC02396-201ENST00000546911 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
LINC02396-201ENST00000546911 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 GNPATO15228 680 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 FCHSD2O94868 740 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
LINC02396-201ENST00000546911 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC02396-201ENST00000546911 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
LINC02396-201ENST00000546911 UTRNP46939 3433 aa13.1□□□□□ -0.31
LINC02396-201ENST00000546911 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
LINC02396-201ENST00000546911 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
LINC02396-201ENST00000546911 C5P01031 1676 aa13.08□□□□□ -0.31
LINC02396-201ENST00000546911 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
LINC02396-201ENST00000546911 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
LINC02396-201ENST00000546911 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.32
LINC02396-201ENST00000546911 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
LINC02396-201ENST00000546911 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
LINC02396-201ENST00000546911 ADRA2BP18089 450 aa13.06□□□□□ -0.32
LINC02396-201ENST00000546911 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
LINC02396-201ENST00000546911 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
LINC02396-201ENST00000546911 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
LINC02396-201ENST00000546911 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
LINC02396-201ENST00000546911 RFC4P35249 363 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 TEFQ10587 303 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 RALBP1Q15311 655 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 NLGN2Q8NFZ4 835 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
LINC02396-201ENST00000546911 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
LINC02396-201ENST00000546911 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
LINC02396-201ENST00000546911 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
LINC02396-201ENST00000546911 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
LINC02396-201ENST00000546911 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
LINC02396-201ENST00000546911 GYS1P13807 737 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 YY1P25490 414 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 GPR162Q16538 588 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 MRC1P22897 1456 aa13.03□□□□□ -0.32
LINC02396-201ENST00000546911 MMP10P09238 476 aa13.02□□□□□ -0.33
LINC02396-201ENST00000546911 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
LINC02396-201ENST00000546911 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
LINC02396-201ENST00000546911 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
LINC02396-201ENST00000546911 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
LINC02396-201ENST00000546911 CCDC87Q9NVE4 849 aa13.02□□□□□ -0.33
LINC02396-201ENST00000546911 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
LINC02396-201ENST00000546911 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
LINC02396-201ENST00000546911 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
LINC02396-201ENST00000546911 BTBD11A6QL63 1104 aa13□□□□□ -0.33
LINC02396-201ENST00000546911 KCNQ3O43525 872 aa13□□□□□ -0.33
LINC02396-201ENST00000546911 STARD3NLO95772 234 aa13□□□□□ -0.33
LINC02396-201ENST00000546911 MCM10Q7L590 875 aa13□□□□□ -0.33
LINC02396-201ENST00000546911 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
LINC02396-201ENST00000546911 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
LINC02396-201ENST00000546911 NEFMP07197 916 aa12.99□□□□□ -0.33
LINC02396-201ENST00000546911 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
LINC02396-201ENST00000546911 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
LINC02396-201ENST00000546911 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
LINC02396-201ENST00000546911 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
LINC02396-201ENST00000546911 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
LINC02396-201ENST00000546911 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
LINC02396-201ENST00000546911 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
LINC02396-201ENST00000546911 SOS1Q07889 1333 aaPredicted RBP12.98□□□□□ -0.33
LINC02396-201ENST00000546911 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
LINC02396-201ENST00000546911 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC02396-201ENST00000546911 FKBP8Q14318 412 aa12.98□□□□□ -0.33
LINC02396-201ENST00000546911 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
LINC02396-201ENST00000546911 COL5A3P25940 1745 aaPredicted RBP12.97□□□□□ -0.33
LINC02396-201ENST00000546911 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
LINC02396-201ENST00000546911 ZPR1O75312 459 aa12.97□□□□□ -0.33
LINC02396-201ENST00000546911 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms