RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 RAB6BQ9NRW1 208 aa10.99□□□□□ -0.65
NPAS3-204ENST00000546849 SERTAD1Q9UHV2 236 aa10.99□□□□□ -0.65
NPAS3-204ENST00000546849 INHAP05111 366 aa10.98□□□□□ -0.65
NPAS3-204ENST00000546849 RELBQ01201 579 aa10.98□□□□□ -0.65
NPAS3-204ENST00000546849 TSEN2Q8NCE0 465 aaKnown RBP10.98□□□□□ -0.65
NPAS3-204ENST00000546849 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
NPAS3-204ENST00000546849 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
NPAS3-204ENST00000546849 M0R2N6 131 aa10.97□□□□□ -0.65
NPAS3-204ENST00000546849 MEN1O00255 615 aa10.97□□□□□ -0.65
NPAS3-204ENST00000546849 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
NPAS3-204ENST00000546849 GTF2E1P29083 439 aaPredicted RBP10.97□□□□□ -0.65
NPAS3-204ENST00000546849 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
NPAS3-204ENST00000546849 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
NPAS3-204ENST00000546849 PRMT3O60678 531 aa10.96□□□□□ -0.65
NPAS3-204ENST00000546849 SCNN1DP51172 638 aa10.96□□□□□ -0.65
NPAS3-204ENST00000546849 KCNA1Q09470 495 aa10.96□□□□□ -0.65
NPAS3-204ENST00000546849 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
NPAS3-204ENST00000546849 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
NPAS3-204ENST00000546849 WASLO00401 505 aaPredicted RBP10.95□□□□□ -0.66
NPAS3-204ENST00000546849 STAU1O95793 577 aaKnown RBP10.95□□□□□ -0.66
NPAS3-204ENST00000546849 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
NPAS3-204ENST00000546849 PTGIRP43119 386 aa10.95□□□□□ -0.66
NPAS3-204ENST00000546849 Q6ZVU0 165 aa10.95□□□□□ -0.66
NPAS3-204ENST00000546849 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
NPAS3-204ENST00000546849 LGR5O75473 907 aa10.94□□□□□ -0.66
NPAS3-204ENST00000546849 DKK1O94907 266 aa10.94□□□□□ -0.66
NPAS3-204ENST00000546849 TLR1Q15399 786 aa10.94□□□□□ -0.66
NPAS3-204ENST00000546849 TRIM47Q96LD4 638 aa10.94□□□□□ -0.66
NPAS3-204ENST00000546849 TSEN34Q9BSV6 310 aaKnown RBP10.94□□□□□ -0.66
NPAS3-204ENST00000546849 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
NPAS3-204ENST00000546849 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-204ENST00000546849 NFX1Q12986 1120 aaKnown RBP10.93□□□□□ -0.66
NPAS3-204ENST00000546849 MEIOBQ8N635 442 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
NPAS3-204ENST00000546849 KLF16Q9BXK1 252 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-204ENST00000546849 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-204ENST00000546849 WFS1O76024 890 aa10.92□□□□□ -0.66
NPAS3-204ENST00000546849 CLN3Q13286 438 aa10.92□□□□□ -0.66
NPAS3-204ENST00000546849 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
NPAS3-204ENST00000546849 ESYT1Q9BSJ8 1104 aa10.92□□□□□ -0.66
NPAS3-204ENST00000546849 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
NPAS3-204ENST00000546849 NBPF15Q8N660 670 aa10.91□□□□□ -0.66
NPAS3-204ENST00000546849 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
NPAS3-204ENST00000546849 A6NJY4 79 aa10.9□□□□□ -0.66
NPAS3-204ENST00000546849 IL2RAP01589 272 aa10.9□□□□□ -0.66
NPAS3-204ENST00000546849 BMP2P12643 396 aa10.9□□□□□ -0.66
NPAS3-204ENST00000546849 SMTNP53814 917 aa10.9□□□□□ -0.66
NPAS3-204ENST00000546849 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
NPAS3-204ENST00000546849 SCG3Q8WXD2 468 aaKnown RBP10.9□□□□□ -0.66
NPAS3-204ENST00000546849 XAGE2Q96GT9 111 aa10.9□□□□□ -0.66
NPAS3-204ENST00000546849 POLMQ9NP87 494 aaPredicted RBP10.9□□□□□ -0.66
NPAS3-204ENST00000546849 SSFA2P28290 1259 aa10.89□□□□□ -0.67
NPAS3-204ENST00000546849 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
NPAS3-204ENST00000546849 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
NPAS3-204ENST00000546849 CXXC1Q9P0U4 656 aaPredicted RBP10.89□□□□□ -0.67
NPAS3-204ENST00000546849 PPP1R12BO60237 982 aaPredicted RBP10.88□□□□□ -0.67
NPAS3-204ENST00000546849 SCARF1Q14162 830 aa10.88□□□□□ -0.67
NPAS3-204ENST00000546849 C6orf118Q5T5N4 469 aa10.88□□□□□ -0.67
NPAS3-204ENST00000546849 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
NPAS3-204ENST00000546849 SLC4A9Q96Q91 983 aa10.88□□□□□ -0.67
NPAS3-204ENST00000546849 IGFBP4P22692 258 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 ARID4AP29374 1257 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-204ENST00000546849 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-204ENST00000546849 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 TSPAN10Q9H1Z9 355 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-204ENST00000546849 PODXL2Q9NZ53 605 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
NPAS3-204ENST00000546849 CENPCQ03188 943 aa10.86□□□□□ -0.67
NPAS3-204ENST00000546849 GNASQ5JWF2 1037 aa10.86□□□□□ -0.67
NPAS3-204ENST00000546849 GAS2L2Q8NHY3 880 aa10.86□□□□□ -0.67
NPAS3-204ENST00000546849 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
NPAS3-204ENST00000546849 SCHIP1Q9P0W5 487 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-204ENST00000546849 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
NPAS3-204ENST00000546849 FOXO3O43524 673 aa10.85□□□□□ -0.67
NPAS3-204ENST00000546849 OCLNQ16625 522 aa10.85□□□□□ -0.67
NPAS3-204ENST00000546849 INSM2Q96T92 566 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-204ENST00000546849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.67
NPAS3-204ENST00000546849 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
NPAS3-204ENST00000546849 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
NPAS3-204ENST00000546849 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
NPAS3-204ENST00000546849 WEE1P30291 646 aa10.84□□□□□ -0.67
NPAS3-204ENST00000546849 PSMA6P60900 246 aaKnown RBP10.84□□□□□ -0.67
NPAS3-204ENST00000546849 TBCELQ5QJ74 424 aa10.84□□□□□ -0.67
NPAS3-204ENST00000546849 MRPL14Q6P1L8 145 aaKnown RBP10.84□□□□□ -0.67
NPAS3-204ENST00000546849 TRIM46Q7Z4K8 759 aa10.84□□□□□ -0.67
NPAS3-204ENST00000546849 KDF1Q8NAX2 398 aaPredicted RBP10.84□□□□□ -0.67
NPAS3-204ENST00000546849 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
NPAS3-204ENST00000546849 ZNF232Q9UNY5 417 aa10.84□□□□□ -0.67
NPAS3-204ENST00000546849 CDK2AP1O14519 115 aa10.83□□□□□ -0.68
NPAS3-204ENST00000546849 WIPF1O43516 503 aa10.83□□□□□ -0.68
NPAS3-204ENST00000546849 GPC1P35052 558 aa10.83□□□□□ -0.68
NPAS3-204ENST00000546849 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
NPAS3-204ENST00000546849 GZF1Q9H116 711 aaPredicted RBP10.83□□□□□ -0.68
NPAS3-204ENST00000546849 SPINT1O43278 529 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms