RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 CDCA7LQ96GN5 454 aa21.86■■□□□ 1.09
SVOP-201ENST00000546618 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
SVOP-201ENST00000546618 CHL1O00533 1208 aa21.85■■□□□ 1.09
SVOP-201ENST00000546618 TRMT2AQ8IZ69 625 aaKnown RBP21.85■■□□□ 1.09
SVOP-201ENST00000546618 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
SVOP-201ENST00000546618 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
SVOP-201ENST00000546618 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
SVOP-201ENST00000546618 ADAMTS7Q9UKP4 1686 aa21.84■■□□□ 1.09
SVOP-201ENST00000546618 BCL9O00512 1426 aa21.83■■□□□ 1.09
SVOP-201ENST00000546618 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
SVOP-201ENST00000546618 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
SVOP-201ENST00000546618 TSPYL4Q9UJ04 414 aa21.81■■□□□ 1.08
SVOP-201ENST00000546618 BAG6P46379 1132 aa21.8■■□□□ 1.08
SVOP-201ENST00000546618 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
SVOP-201ENST00000546618 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
SVOP-201ENST00000546618 FAM196AQ6ZSG2 479 aa21.8■■□□□ 1.08
SVOP-201ENST00000546618 MBIPQ9NS73 344 aa21.8■■□□□ 1.08
SVOP-201ENST00000546618 MRC1P22897 1456 aa21.79■■□□□ 1.08
SVOP-201ENST00000546618 MIS18AQ9NYP9 233 aa21.79■■□□□ 1.08
SVOP-201ENST00000546618 FANCIQ9NVI1 1328 aa21.79■■□□□ 1.08
SVOP-201ENST00000546618 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
SVOP-201ENST00000546618 SCN11AQ9UI33 1791 aa21.78■■□□□ 1.08
SVOP-201ENST00000546618 PIGBQ92521 554 aa21.77■■□□□ 1.08
SVOP-201ENST00000546618 SYTL4Q96C24 671 aaPredicted RBP21.77■■□□□ 1.08
SVOP-201ENST00000546618 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
SVOP-201ENST00000546618 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
SVOP-201ENST00000546618 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
SVOP-201ENST00000546618 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
SVOP-201ENST00000546618 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
SVOP-201ENST00000546618 KCNQ2O43526 872 aa21.72■■□□□ 1.07
SVOP-201ENST00000546618 CT47B1P0C2W7 299 aaPredicted RBP21.72■■□□□ 1.07
SVOP-201ENST00000546618 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
SVOP-201ENST00000546618 EXOSC9Q06265 439 aaKnown RBP21.72■■□□□ 1.07
SVOP-201ENST00000546618 SLC39A6Q13433 755 aa21.72■■□□□ 1.07
SVOP-201ENST00000546618 KCNQ3O43525 872 aa21.71■■□□□ 1.07
SVOP-201ENST00000546618 BCL11BQ9C0K0 894 aaPredicted RBP21.71■■□□□ 1.07
SVOP-201ENST00000546618 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
SVOP-201ENST00000546618 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
SVOP-201ENST00000546618 SMARCC1Q92922 1105 aaPredicted RBP21.7■■□□□ 1.06
SVOP-201ENST00000546618 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
SVOP-201ENST00000546618 SOS1Q07889 1333 aaPredicted RBP21.7■■□□□ 1.06
SVOP-201ENST00000546618 LRP5O75197 1615 aa21.69■■□□□ 1.06
SVOP-201ENST00000546618 SIPA1L3O60292 1781 aaPredicted RBP21.69■■□□□ 1.06
SVOP-201ENST00000546618 C8orf58Q8NAV2 365 aa21.69■■□□□ 1.06
SVOP-201ENST00000546618 FMNL2Q96PY5 1086 aa21.69■■□□□ 1.06
SVOP-201ENST00000546618 DOT1LQ8TEK3 1739 aa21.67■■□□□ 1.06
SVOP-201ENST00000546618 HEG1Q9ULI3 1381 aa21.67■■□□□ 1.06
SVOP-201ENST00000546618 EN1Q05925 392 aaPredicted RBP21.67■■□□□ 1.06
SVOP-201ENST00000546618 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
SVOP-201ENST00000546618 ZNF496Q96IT1 587 aaPredicted RBP21.67■■□□□ 1.06
SVOP-201ENST00000546618 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
SVOP-201ENST00000546618 VIRMAQ69YN4 1812 aaKnown RBP21.66■■□□□ 1.06
SVOP-201ENST00000546618 HOXB7P09629 217 aa21.66■■□□□ 1.06
SVOP-201ENST00000546618 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
SVOP-201ENST00000546618 VAMP4O75379 141 aa21.65■■□□□ 1.06
SVOP-201ENST00000546618 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
SVOP-201ENST00000546618 TRIM37O94972 964 aa21.65■■□□□ 1.06
SVOP-201ENST00000546618 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
SVOP-201ENST00000546618 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
SVOP-201ENST00000546618 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
SVOP-201ENST00000546618 TSPYL6Q8N831 410 aa21.65■■□□□ 1.06
SVOP-201ENST00000546618 ELL2O00472 640 aaPredicted RBP21.64■■□□□ 1.05
SVOP-201ENST00000546618 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
SVOP-201ENST00000546618 PTF1AQ7RTS3 328 aa21.64■■□□□ 1.05
SVOP-201ENST00000546618 ITGB4P16144 1822 aa21.64■■□□□ 1.05
SVOP-201ENST00000546618 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
SVOP-201ENST00000546618 TNS1Q9HBL0 1735 aaKnown RBP21.63■■□□□ 1.05
SVOP-201ENST00000546618 PSDA5PKW4 1024 aaPredicted RBP21.63■■□□□ 1.05
SVOP-201ENST00000546618 NHSQ6T4R5 1651 aa21.63■■□□□ 1.05
SVOP-201ENST00000546618 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
SVOP-201ENST00000546618 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
SVOP-201ENST00000546618 RCAN3Q9UKA8 241 aa21.61■■□□□ 1.05
SVOP-201ENST00000546618 PALLDQ8WX93 1383 aa21.61■■□□□ 1.05
SVOP-201ENST00000546618 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
SVOP-201ENST00000546618 KCPQ6ZWJ8 1503 aa21.6■■□□□ 1.05
SVOP-201ENST00000546618 LOC102724428A0A0B4J2F2 783 aa21.59■■□□□ 1.05
SVOP-201ENST00000546618 SIK1P57059 783 aa21.59■■□□□ 1.05
SVOP-201ENST00000546618 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
SVOP-201ENST00000546618 CAMKK2Q96RR4 588 aa21.59■■□□□ 1.05
SVOP-201ENST00000546618 RARSP54136 660 aaKnown RBP21.58■■□□□ 1.05
SVOP-201ENST00000546618 EZH2Q15910 746 aaKnown RBP21.58■■□□□ 1.05
SVOP-201ENST00000546618 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.05
SVOP-201ENST00000546618 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
SVOP-201ENST00000546618 HDGFL1Q5TGJ6 251 aa21.57■■□□□ 1.04
SVOP-201ENST00000546618 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
SVOP-201ENST00000546618 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
SVOP-201ENST00000546618 PLSCR1O15162 318 aa21.56■■□□□ 1.04
SVOP-201ENST00000546618 APBA3O96018 575 aa21.56■■□□□ 1.04
SVOP-201ENST00000546618 HMGB2P26583 209 aaKnown RBP21.56■■□□□ 1.04
SVOP-201ENST00000546618 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
SVOP-201ENST00000546618 USP16Q9Y5T5 823 aa21.56■■□□□ 1.04
SVOP-201ENST00000546618 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
SVOP-201ENST00000546618 STARD3NLO95772 234 aa21.55■■□□□ 1.04
SVOP-201ENST00000546618 EIF2S2P20042 333 aaKnown RBP21.55■■□□□ 1.04
SVOP-201ENST00000546618 ATP6V1AP38606 617 aa21.55■■□□□ 1.04
SVOP-201ENST00000546618 UBR2Q8IWV8 1755 aa21.55■■□□□ 1.04
SVOP-201ENST00000546618 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
SVOP-201ENST00000546618 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
SVOP-201ENST00000546618 BRPF1P55201 1214 aaPredicted RBP21.53■■□□□ 1.04
SVOP-201ENST00000546618 DNAJC10Q8IXB1 793 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms