RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 NEK4P51957 841 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 ZNF771Q7L3S4 317 aaPredicted RBP12.39□□□□□ -0.43
SSH1-203ENST00000546433 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSH1-203ENST00000546433 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
SSH1-203ENST00000546433 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
SSH1-203ENST00000546433 RUFY1Q96T51 708 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 MVPQ14764 893 aaKnown RBP12.38□□□□□ -0.43
SSH1-203ENST00000546433 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
SSH1-203ENST00000546433 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSH1-203ENST00000546433 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
SSH1-203ENST00000546433 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
SSH1-203ENST00000546433 TTLL12Q14166 644 aaPredicted RBP12.37□□□□□ -0.43
SSH1-203ENST00000546433 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 MAP7D2Q96T17 732 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 PZPP20742 1482 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 TXLNAP40222 546 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 FOSBP53539 338 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 DNAJC2Q99543 621 aaKnown RBP12.37□□□□□ -0.43
SSH1-203ENST00000546433 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
SSH1-203ENST00000546433 CYP46A1Q9Y6A2 500 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
SSH1-203ENST00000546433 RBM5P52756 815 aaKnown RBP eCLIP12.36□□□□□ -0.43
SSH1-203ENST00000546433 TTC39AQ5SRH9 613 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 FCHSD2O94868 740 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 EPS15P42566 896 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 DIP2BQ9P265 1576 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 TTC37Q6PGP7 1564 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
SSH1-203ENST00000546433 FILIP1LQ4L180 1135 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
SSH1-203ENST00000546433 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
SSH1-203ENST00000546433 NSD2O96028 1365 aa12.35□□□□□ -0.43
SSH1-203ENST00000546433 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
SSH1-203ENST00000546433 HSP90B2PQ58FF3 399 aa12.35□□□□□ -0.43
SSH1-203ENST00000546433 SIRT1Q96EB6 747 aa12.35□□□□□ -0.43
SSH1-203ENST00000546433 NAP1L1P55209 391 aaKnown RBP12.35□□□□□ -0.43
SSH1-203ENST00000546433 ABCA9Q8IUA7 1624 aa12.35□□□□□ -0.43
SSH1-203ENST00000546433 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 NF2P35240 595 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 FYB1O15117 783 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 OFD1O75665 1012 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 CT47A1Q5JQC4 288 aaPredicted RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 CABLES1Q8TDN4 633 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 SHROOM2Q13796 1616 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 BCAR3O75815 825 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
SSH1-203ENST00000546433 CCNL1Q9UK58 526 aaPredicted RBP12.34□□□□□ -0.43
SSH1-203ENST00000546433 STK38Q15208 465 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
SSH1-203ENST00000546433 DACH1Q9UI36 760 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
SSH1-203ENST00000546433 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
SSH1-203ENST00000546433 MAGEC2Q9UBF1 373 aaPredicted RBP12.33□□□□□ -0.44
SSH1-203ENST00000546433 ARHGEF40Q8TER5 1519 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 AFF2P51816 1311 aa12.33□□□□□ -0.44
SSH1-203ENST00000546433 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
SSH1-203ENST00000546433 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
SSH1-203ENST00000546433 NME9Q86XW9 330 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 PDILTQ8N807 584 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
SSH1-203ENST00000546433 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
SSH1-203ENST00000546433 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 ODF2Q5BJF6 829 aa12.32□□□□□ -0.44
SSH1-203ENST00000546433 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms