RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
KDM1B-203ENST00000546309 CFAP53Q96M91 514 aa10.25□□□□□ -0.77
KDM1B-203ENST00000546309 ASAP1Q9ULH1 1129 aa10.25□□□□□ -0.77
KDM1B-203ENST00000546309 ADAMTS7Q9UKP4 1686 aa10.25□□□□□ -0.77
KDM1B-203ENST00000546309 MTHFSP49914 203 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
KDM1B-203ENST00000546309 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 KDRP35968 1356 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 PALLDQ8WX93 1383 aa10.24□□□□□ -0.77
KDM1B-203ENST00000546309 TATP17735 454 aaPredicted RBP10.23□□□□□ -0.77
KDM1B-203ENST00000546309 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
KDM1B-203ENST00000546309 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
KDM1B-203ENST00000546309 MPRIPQ6WCQ1 1025 aa10.23□□□□□ -0.77
KDM1B-203ENST00000546309 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
KDM1B-203ENST00000546309 COL5A3P25940 1745 aaPredicted RBP10.23□□□□□ -0.77
KDM1B-203ENST00000546309 MSH5O43196 834 aa10.22□□□□□ -0.77
KDM1B-203ENST00000546309 GIGYF1O75420 1035 aaPredicted RBP10.22□□□□□ -0.77
KDM1B-203ENST00000546309 PHKG2P15735 406 aa10.22□□□□□ -0.77
KDM1B-203ENST00000546309 C1QTNF8P60827 252 aa10.22□□□□□ -0.77
KDM1B-203ENST00000546309 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.77
KDM1B-203ENST00000546309 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.77
KDM1B-203ENST00000546309 RAPGEF4Q8WZA2 1011 aa10.21□□□□□ -0.77
KDM1B-203ENST00000546309 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.77
KDM1B-203ENST00000546309 PCDH11XQ9BZA7 1347 aa10.21□□□□□ -0.78
KDM1B-203ENST00000546309 PCDH11YQ9BZA8 1340 aa10.21□□□□□ -0.78
KDM1B-203ENST00000546309 COL3A1P02461 1466 aaPredicted RBP10.21□□□□□ -0.78
KDM1B-203ENST00000546309 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
KDM1B-203ENST00000546309 TJP1Q07157 1748 aa10.2□□□□□ -0.78
KDM1B-203ENST00000546309 NUDCQ9Y266 331 aa10.2□□□□□ -0.78
KDM1B-203ENST00000546309 KIF13BQ9NQT8 1826 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 C4AP0C0L4 1744 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 ZNF831Q5JPB2 1677 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 LOC102724428A0A0B4J2F2 783 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 IL13P35225 146 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 SIK1P57059 783 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.78
KDM1B-203ENST00000546309 SCN11AQ9UI33 1791 aa10.19□□□□□ -0.78
KDM1B-203ENST00000546309 PNNQ9H307 717 aaKnown RBP10.18□□□□□ -0.78
KDM1B-203ENST00000546309 BRCA1P38398 1863 aaKnown RBP10.17□□□□□ -0.78
KDM1B-203ENST00000546309 N4BP2Q86UW6 1770 aaPredicted RBP10.17□□□□□ -0.78
KDM1B-203ENST00000546309 ZNF521Q96K83 1311 aa10.17□□□□□ -0.78
KDM1B-203ENST00000546309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
KDM1B-203ENST00000546309 DIAPH1O60610 1272 aaKnown RBP10.17□□□□□ -0.78
KDM1B-203ENST00000546309 RUNDC1Q96C34 613 aa10.17□□□□□ -0.78
KDM1B-203ENST00000546309 CICQ96RK0 1608 aaPredicted RBP10.16□□□□□ -0.78
KDM1B-203ENST00000546309 GRIN3BO60391 1043 aa10.16□□□□□ -0.78
KDM1B-203ENST00000546309 FCHSD2O94868 740 aa10.16□□□□□ -0.78
KDM1B-203ENST00000546309 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
KDM1B-203ENST00000546309 WWC3Q9ULE0 1092 aa10.16□□□□□ -0.78
KDM1B-203ENST00000546309 ADCY9O60503 1353 aa10.15□□□□□ -0.78
KDM1B-203ENST00000546309 LGR6Q9HBX8 967 aa10.15□□□□□ -0.78
KDM1B-203ENST00000546309 PHF14O94880 888 aa10.14□□□□□ -0.79
KDM1B-203ENST00000546309 KCNA3P22001 575 aa10.14□□□□□ -0.79
KDM1B-203ENST00000546309 HMGB2P26583 209 aaKnown RBP10.14□□□□□ -0.79
KDM1B-203ENST00000546309 IFNL2Q8IZJ0 200 aa10.14□□□□□ -0.79
KDM1B-203ENST00000546309 PLEKHF1Q96S99 279 aa10.14□□□□□ -0.79
KDM1B-203ENST00000546309 KCPQ6ZWJ8 1503 aa10.13□□□□□ -0.79
KDM1B-203ENST00000546309 PXDNLA1KZ92 1463 aa10.13□□□□□ -0.79
KDM1B-203ENST00000546309 CEP350Q5VT06 3117 aa10.13□□□□□ -0.79
KDM1B-203ENST00000546309 INTS5Q6P9B9 1019 aaKnown RBP10.13□□□□□ -0.79
KDM1B-203ENST00000546309 TRMT2AQ8IZ69 625 aaKnown RBP10.13□□□□□ -0.79
KDM1B-203ENST00000546309 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
KDM1B-203ENST00000546309 MRC1P22897 1456 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 APAF1O14727 1248 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 U2AF1L5P0DN76 240 aaPredicted RBP10.12□□□□□ -0.79
KDM1B-203ENST00000546309 GYS1P13807 737 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 U2AF1Q01081 240 aaKnown RBP eCLIP10.12□□□□□ -0.79
KDM1B-203ENST00000546309 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 WDR63Q8IWG1 891 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
KDM1B-203ENST00000546309 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
KDM1B-203ENST00000546309 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
KDM1B-203ENST00000546309 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
KDM1B-203ENST00000546309 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 RNF123Q5XPI4 1314 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 ERVV-2B6SEH9 535 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 GNPATO15228 680 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 DDR1Q08345 913 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 SRP68Q9UHB9 627 aaKnown RBP10.11□□□□□ -0.79
KDM1B-203ENST00000546309 CD2APQ9Y5K6 639 aa10.11□□□□□ -0.79
KDM1B-203ENST00000546309 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
KDM1B-203ENST00000546309 SSFA2P28290 1259 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 PRELPP51888 382 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
KDM1B-203ENST00000546309 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 FLAD1Q8NFF5 587 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 ZNF526Q8TF50 670 aaPredicted RBP10.1□□□□□ -0.79
KDM1B-203ENST00000546309 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
KDM1B-203ENST00000546309 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
KDM1B-203ENST00000546309 CNTNAP4Q9C0A0 1308 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms