RNA–Protein interactions for RNA: ENST00000546293.1

ARAP1-221, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene ARAP1, Length 702 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-221ENST00000546293 DCTN1Q14203 1278 aa23.25■■□□□ 1.31
ARAP1-221ENST00000546293 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
ARAP1-221ENST00000546293 TRIM35Q9UPQ4 493 aa23.25■■□□□ 1.31
ARAP1-221ENST00000546293 EN1Q05925 392 aaPredicted RBP23.24■■□□□ 1.31
ARAP1-221ENST00000546293 TEFQ10587 303 aa23.24■■□□□ 1.31
ARAP1-221ENST00000546293 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
ARAP1-221ENST00000546293 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
ARAP1-221ENST00000546293 VIRMAQ69YN4 1812 aaKnown RBP23.23■■□□□ 1.31
ARAP1-221ENST00000546293 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
ARAP1-221ENST00000546293 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
ARAP1-221ENST00000546293 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
ARAP1-221ENST00000546293 ASAP1Q9ULH1 1129 aa23.22■■□□□ 1.31
ARAP1-221ENST00000546293 PALLDQ8WX93 1383 aa23.2■■□□□ 1.3
ARAP1-221ENST00000546293 EZH2Q15910 746 aaKnown RBP23.2■■□□□ 1.3
ARAP1-221ENST00000546293 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
ARAP1-221ENST00000546293 PROM2Q8N271 834 aa23.2■■□□□ 1.3
ARAP1-221ENST00000546293 SIPA1L3O60292 1781 aaPredicted RBP23.19■■□□□ 1.3
ARAP1-221ENST00000546293 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
ARAP1-221ENST00000546293 THUMPD2Q9BTF0 503 aaKnown RBP23.19■■□□□ 1.3
ARAP1-221ENST00000546293 TXNRD1Q16881 649 aa23.18■■□□□ 1.3
ARAP1-221ENST00000546293 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
ARAP1-221ENST00000546293 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
ARAP1-221ENST00000546293 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
ARAP1-221ENST00000546293 LY75O60449 1722 aa23.16■■□□□ 1.3
ARAP1-221ENST00000546293 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
ARAP1-221ENST00000546293 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
ARAP1-221ENST00000546293 BABAM1Q9NWV8 329 aa23.15■■□□□ 1.3
ARAP1-221ENST00000546293 LOC102724428A0A0B4J2F2 783 aa23.14■■□□□ 1.29
ARAP1-221ENST00000546293 SIK1P57059 783 aa23.14■■□□□ 1.29
ARAP1-221ENST00000546293 ZNF790Q6PG37 636 aa23.14■■□□□ 1.29
ARAP1-221ENST00000546293 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
ARAP1-221ENST00000546293 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
ARAP1-221ENST00000546293 RREB1Q92766 1687 aa23.13■■□□□ 1.29
ARAP1-221ENST00000546293 CALD1Q05682 793 aaKnown RBP23.12■■□□□ 1.29
ARAP1-221ENST00000546293 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
ARAP1-221ENST00000546293 CCNL1Q9UK58 526 aaPredicted RBP23.12■■□□□ 1.29
ARAP1-221ENST00000546293 SENP3-EIF4A1A0A087X0R7 540 aa23.11■■□□□ 1.29
ARAP1-221ENST00000546293 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
ARAP1-221ENST00000546293 KCPQ6ZWJ8 1503 aa23.11■■□□□ 1.29
ARAP1-221ENST00000546293 CHL1O00533 1208 aa23.1■■□□□ 1.29
ARAP1-221ENST00000546293 KCNQ3O43525 872 aa23.1■■□□□ 1.29
ARAP1-221ENST00000546293 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
ARAP1-221ENST00000546293 HMGB2P26583 209 aaKnown RBP23.1■■□□□ 1.29
ARAP1-221ENST00000546293 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
ARAP1-221ENST00000546293 MIS18AQ9NYP9 233 aa23.1■■□□□ 1.29
ARAP1-221ENST00000546293 ZNF831Q5JPB2 1677 aa23.09■■□□□ 1.29
ARAP1-221ENST00000546293 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
ARAP1-221ENST00000546293 VSIG10Q8N0Z9 540 aa23.09■■□□□ 1.29
ARAP1-221ENST00000546293 CFAP44Q96MT7 982 aa23.09■■□□□ 1.29
ARAP1-221ENST00000546293 UBR2Q8IWV8 1755 aa23.09■■□□□ 1.29
ARAP1-221ENST00000546293 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
ARAP1-221ENST00000546293 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
ARAP1-221ENST00000546293 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
ARAP1-221ENST00000546293 IL16Q14005 1332 aa23.08■■□□□ 1.28
ARAP1-221ENST00000546293 KCNQ4P56696 695 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 ITPK1Q13572 414 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 IFT57Q9NWB7 429 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 SALL2Q9Y467 1007 aaPredicted RBP23.07■■□□□ 1.28
ARAP1-221ENST00000546293 NUP188Q5SRE5 1749 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 ZNF521Q96K83 1311 aa23.07■■□□□ 1.28
ARAP1-221ENST00000546293 KDM3BQ7LBC6 1761 aa23.06■■□□□ 1.28
ARAP1-221ENST00000546293 CICQ96RK0 1608 aaPredicted RBP23.05■■□□□ 1.28
ARAP1-221ENST00000546293 HEG1Q9ULI3 1381 aa23.05■■□□□ 1.28
ARAP1-221ENST00000546293 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
ARAP1-221ENST00000546293 GNAI1P63096 354 aa23.05■■□□□ 1.28
ARAP1-221ENST00000546293 LINC00116Q8NCU8 138 aa23.03■■□□□ 1.28
ARAP1-221ENST00000546293 NBPF14Q5TI25 921 aa23.02■■□□□ 1.28
ARAP1-221ENST00000546293 AKT1S1Q96B36 256 aa23.02■■□□□ 1.28
ARAP1-221ENST00000546293 ANO8Q9HCE9 1232 aaPredicted RBP23.02■■□□□ 1.28
ARAP1-221ENST00000546293 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
ARAP1-221ENST00000546293 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
ARAP1-221ENST00000546293 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
ARAP1-221ENST00000546293 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
ARAP1-221ENST00000546293 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
ARAP1-221ENST00000546293 C5P01031 1676 aa23■■□□□ 1.27
ARAP1-221ENST00000546293 TJP1Q07157 1748 aa23■■□□□ 1.27
ARAP1-221ENST00000546293 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
ARAP1-221ENST00000546293 RC3H1Q5TC82 1133 aaKnown RBP23■■□□□ 1.27
ARAP1-221ENST00000546293 GIGYF1O75420 1035 aaPredicted RBP22.99■■□□□ 1.27
ARAP1-221ENST00000546293 CYP19A1P11511 503 aaPredicted RBP22.99■■□□□ 1.27
ARAP1-221ENST00000546293 SLC15A2Q16348 729 aa22.99■■□□□ 1.27
ARAP1-221ENST00000546293 ZNF827Q17R98 1081 aa22.99■■□□□ 1.27
ARAP1-221ENST00000546293 STK32BQ9NY57 414 aa22.99■■□□□ 1.27
ARAP1-221ENST00000546293 CNTNAP4Q9C0A0 1308 aa22.99■■□□□ 1.27
ARAP1-221ENST00000546293 C4BP0C0L5 1744 aa22.97■■□□□ 1.27
ARAP1-221ENST00000546293 COL5A3P25940 1745 aaPredicted RBP22.97■■□□□ 1.27
ARAP1-221ENST00000546293 STARD3NLO95772 234 aa22.96■■□□□ 1.27
ARAP1-221ENST00000546293 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
ARAP1-221ENST00000546293 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
ARAP1-221ENST00000546293 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
ARAP1-221ENST00000546293 PRAMEF22A3QJZ6 481 aa22.95■■□□□ 1.26
ARAP1-221ENST00000546293 HNRNPUQ00839 825 aaKnown RBP eCLIP22.95■■□□□ 1.26
ARAP1-221ENST00000546293 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
ARAP1-221ENST00000546293 INTS5Q6P9B9 1019 aaKnown RBP22.94■■□□□ 1.26
ARAP1-221ENST00000546293 AK7Q96M32 723 aa22.94■■□□□ 1.26
ARAP1-221ENST00000546293 HOXB7P09629 217 aa22.93■■□□□ 1.26
ARAP1-221ENST00000546293 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
ARAP1-221ENST00000546293 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms