RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.13
LMO3-233ENST00000546279 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
LMO3-233ENST00000546279 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
LMO3-233ENST00000546279 FCHSD2O94868 740 aa14.24□□□□□ -0.13
LMO3-233ENST00000546279 SLC16A10Q8TF71 515 aa14.24□□□□□ -0.13
LMO3-233ENST00000546279 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
LMO3-233ENST00000546279 GRIN3BO60391 1043 aa14.23□□□□□ -0.13
LMO3-233ENST00000546279 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
LMO3-233ENST00000546279 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
LMO3-233ENST00000546279 POLD1P28340 1107 aa14.23□□□□□ -0.13
LMO3-233ENST00000546279 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
LMO3-233ENST00000546279 ZCRB1Q8TBF4 217 aaKnown RBP14.23□□□□□ -0.13
LMO3-233ENST00000546279 RAPGEF4Q8WZA2 1011 aa14.23□□□□□ -0.13
LMO3-233ENST00000546279 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
LMO3-233ENST00000546279 NUDCQ9Y266 331 aa14.23□□□□□ -0.13
LMO3-233ENST00000546279 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
LMO3-233ENST00000546279 BTAF1O14981 1849 aa14.22□□□□□ -0.13
LMO3-233ENST00000546279 PRKAR2BP31323 418 aa14.22□□□□□ -0.13
LMO3-233ENST00000546279 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
LMO3-233ENST00000546279 MRC1P22897 1456 aa14.21□□□□□ -0.13
LMO3-233ENST00000546279 NKX1-1Q15270 411 aaPredicted RBP14.21□□□□□ -0.13
LMO3-233ENST00000546279 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
LMO3-233ENST00000546279 PAPPAQ13219 1627 aa14.2□□□□□ -0.14
LMO3-233ENST00000546279 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
LMO3-233ENST00000546279 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
LMO3-233ENST00000546279 CEP350Q5VT06 3117 aa14.2□□□□□ -0.14
LMO3-233ENST00000546279 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
LMO3-233ENST00000546279 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
LMO3-233ENST00000546279 PHKG2P15735 406 aa14.19□□□□□ -0.14
LMO3-233ENST00000546279 LY75O60449 1722 aa14.18□□□□□ -0.14
LMO3-233ENST00000546279 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
LMO3-233ENST00000546279 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
LMO3-233ENST00000546279 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
LMO3-233ENST00000546279 SPG7Q9UQ90 795 aa14.17□□□□□ -0.14
LMO3-233ENST00000546279 HSPA6P17066 643 aa14.16□□□□□ -0.14
LMO3-233ENST00000546279 POLA2Q14181 598 aa14.16□□□□□ -0.14
LMO3-233ENST00000546279 SLC27A3Q5K4L6 730 aa14.16□□□□□ -0.14
LMO3-233ENST00000546279 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
LMO3-233ENST00000546279 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
LMO3-233ENST00000546279 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
LMO3-233ENST00000546279 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
LMO3-233ENST00000546279 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
LMO3-233ENST00000546279 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
LMO3-233ENST00000546279 ABCB7O75027 752 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 ZNF827Q17R98 1081 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 RUNDC1Q96C34 613 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
LMO3-233ENST00000546279 GPBP1L1Q9HC44 474 aaPredicted RBP14.14□□□□□ -0.15
LMO3-233ENST00000546279 CICQ96RK0 1608 aaPredicted RBP14.14□□□□□ -0.15
LMO3-233ENST00000546279 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
LMO3-233ENST00000546279 NFE2L2Q16236 605 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 IL17REQ8NFR9 667 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 TAF1LQ8IZX4 1826 aa14.13□□□□□ -0.15
LMO3-233ENST00000546279 TMPOP42166 694 aaKnown RBP14.12□□□□□ -0.15
LMO3-233ENST00000546279 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
LMO3-233ENST00000546279 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
LMO3-233ENST00000546279 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
LMO3-233ENST00000546279 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
LMO3-233ENST00000546279 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
LMO3-233ENST00000546279 NLGN2Q8NFZ4 835 aa14.11□□□□□ -0.15
LMO3-233ENST00000546279 LRRC4BQ9NT99 713 aa14.11□□□□□ -0.15
LMO3-233ENST00000546279 ATP10DQ9P241 1426 aa14.11□□□□□ -0.15
LMO3-233ENST00000546279 GNAT3A8MTJ3 354 aa14.1□□□□□ -0.15
LMO3-233ENST00000546279 DCAF5Q96JK2 942 aa14.1□□□□□ -0.15
LMO3-233ENST00000546279 TJP1Q07157 1748 aa14.1□□□□□ -0.15
LMO3-233ENST00000546279 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
LMO3-233ENST00000546279 APAF1O14727 1248 aa14.09□□□□□ -0.15
LMO3-233ENST00000546279 HTATSF1O43719 755 aaKnown RBP14.09□□□□□ -0.15
LMO3-233ENST00000546279 YBX3P16989 372 aaKnown RBP eCLIP14.09□□□□□ -0.15
LMO3-233ENST00000546279 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
LMO3-233ENST00000546279 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
LMO3-233ENST00000546279 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
LMO3-233ENST00000546279 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
LMO3-233ENST00000546279 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
LMO3-233ENST00000546279 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.16
LMO3-233ENST00000546279 HMGB2P26583 209 aaKnown RBP14.08□□□□□ -0.16
LMO3-233ENST00000546279 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
LMO3-233ENST00000546279 PIGBQ92521 554 aa14.08□□□□□ -0.16
LMO3-233ENST00000546279 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
LMO3-233ENST00000546279 QSER1Q2KHR3 1735 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 C1orf141Q5JVX7 400 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 ZNF521Q96K83 1311 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
LMO3-233ENST00000546279 TUBGCP6Q96RT7 1819 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 MYH14Q7Z406 1995 aaKnown RBP14.06□□□□□ -0.16
LMO3-233ENST00000546279 RIPK4P57078 832 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 FKBP8Q14318 412 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 MCM10Q7L590 875 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 SLC52A2Q9HAB3 445 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 C5P01031 1676 aa14.06□□□□□ -0.16
LMO3-233ENST00000546279 GOLGB1Q14789 3259 aaKnown RBP14.05□□□□□ -0.16
LMO3-233ENST00000546279 APLP1P51693 650 aa14.05□□□□□ -0.16
LMO3-233ENST00000546279 CCDC27Q2M243 656 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms