RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
CD9-211ENST00000546073 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
CD9-211ENST00000546073 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
CD9-211ENST00000546073 PROM2Q8N271 834 aa22.96■■□□□ 1.27
CD9-211ENST00000546073 IL17REQ8NFR9 667 aa22.96■■□□□ 1.27
CD9-211ENST00000546073 PTCD1O75127 700 aaKnown RBP22.95■■□□□ 1.26
CD9-211ENST00000546073 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.26
CD9-211ENST00000546073 R3HDM1Q15032 1099 aaKnown RBP22.95■■□□□ 1.26
CD9-211ENST00000546073 MCM10Q7L590 875 aa22.95■■□□□ 1.26
CD9-211ENST00000546073 BTAF1O14981 1849 aa22.94■■□□□ 1.26
CD9-211ENST00000546073 TFCP2L1Q9NZI6 479 aa22.94■■□□□ 1.26
CD9-211ENST00000546073 CALD1Q05682 793 aaKnown RBP22.93■■□□□ 1.26
CD9-211ENST00000546073 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
CD9-211ENST00000546073 SLC15A2Q16348 729 aa22.93■■□□□ 1.26
CD9-211ENST00000546073 FAM9BQ8IZU0 186 aa22.93■■□□□ 1.26
CD9-211ENST00000546073 AK7Q96M32 723 aa22.93■■□□□ 1.26
CD9-211ENST00000546073 RGPD3A6NKT7 1758 aaPredicted RBP22.92■■□□□ 1.26
CD9-211ENST00000546073 RGPD4Q7Z3J3 1758 aa22.92■■□□□ 1.26
CD9-211ENST00000546073 PSDA5PKW4 1024 aaPredicted RBP22.92■■□□□ 1.26
CD9-211ENST00000546073 CCER2I3L3R5 266 aa22.91■■□□□ 1.26
CD9-211ENST00000546073 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
CD9-211ENST00000546073 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
CD9-211ENST00000546073 FLAD1Q8NFF5 587 aa22.9■■□□□ 1.26
CD9-211ENST00000546073 LRRC4BQ9NT99 713 aa22.9■■□□□ 1.26
CD9-211ENST00000546073 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
CD9-211ENST00000546073 APAF1O14727 1248 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 MSH5O43196 834 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 KCNQ4P56696 695 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 NPM2Q86SE8 214 aaKnown RBP22.89■■□□□ 1.25
CD9-211ENST00000546073 FMNL2Q96PY5 1086 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 TEX13AQ9BXU3 409 aaPredicted RBP22.89■■□□□ 1.25
CD9-211ENST00000546073 CEMIPQ8WUJ3 1361 aa22.89■■□□□ 1.25
CD9-211ENST00000546073 SLC39A6Q13433 755 aa22.88■■□□□ 1.25
CD9-211ENST00000546073 VSIG10Q8N0Z9 540 aa22.87■■□□□ 1.25
CD9-211ENST00000546073 TOGARAM1Q9Y4F4 1720 aa22.86■■□□□ 1.25
CD9-211ENST00000546073 STARD3NLO95772 234 aa22.86■■□□□ 1.25
CD9-211ENST00000546073 ITGB4P16144 1822 aa22.85■■□□□ 1.25
CD9-211ENST00000546073 BABAM1Q9NWV8 329 aa22.84■■□□□ 1.25
CD9-211ENST00000546073 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
CD9-211ENST00000546073 MRC1P22897 1456 aa22.84■■□□□ 1.25
CD9-211ENST00000546073 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
CD9-211ENST00000546073 AKT1S1Q96B36 256 aa22.83■■□□□ 1.25
CD9-211ENST00000546073 ANO8Q9HCE9 1232 aaPredicted RBP22.83■■□□□ 1.25
CD9-211ENST00000546073 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
CD9-211ENST00000546073 RTCBQ9Y3I0 505 aaKnown RBP22.83■■□□□ 1.25
CD9-211ENST00000546073 RREB1Q92766 1687 aa22.83■■□□□ 1.24
CD9-211ENST00000546073 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
CD9-211ENST00000546073 GNPATO15228 680 aa22.81■■□□□ 1.24
CD9-211ENST00000546073 RC3H1Q5TC82 1133 aaKnown RBP22.81■■□□□ 1.24
CD9-211ENST00000546073 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
CD9-211ENST00000546073 SNRPA1P09661 255 aaKnown RBP22.8■■□□□ 1.24
CD9-211ENST00000546073 ITPK1Q13572 414 aa22.8■■□□□ 1.24
CD9-211ENST00000546073 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
CD9-211ENST00000546073 LINC00116Q8NCU8 138 aa22.8■■□□□ 1.24
CD9-211ENST00000546073 SLC16A10Q8TF71 515 aa22.8■■□□□ 1.24
CD9-211ENST00000546073 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
CD9-211ENST00000546073 TRAPPC3LQ5T215 181 aa22.79■■□□□ 1.24
CD9-211ENST00000546073 ZNF496Q96IT1 587 aaPredicted RBP22.79■■□□□ 1.24
CD9-211ENST00000546073 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 PHF14O94880 888 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 SSFA2P28290 1259 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 DNAJC10Q8IXB1 793 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 SPON1Q9HCB6 807 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 MIS18AQ9NYP9 233 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
CD9-211ENST00000546073 LY75O60449 1722 aa22.77■■□□□ 1.24
CD9-211ENST00000546073 CRKLP46109 303 aaKnown RBP22.77■■□□□ 1.24
CD9-211ENST00000546073 GNAI1P63096 354 aa22.77■■□□□ 1.24
CD9-211ENST00000546073 NCBP3Q53F19 620 aaKnown RBP22.77■■□□□ 1.24
CD9-211ENST00000546073 ADRA2BP18089 450 aa22.76■■□□□ 1.23
CD9-211ENST00000546073 CCDC87Q9NVE4 849 aa22.76■■□□□ 1.23
CD9-211ENST00000546073 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
CD9-211ENST00000546073 TRIM35Q9UPQ4 493 aa22.76■■□□□ 1.23
CD9-211ENST00000546073 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 RPS6KA4O75676 772 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 POLD1P28340 1107 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 RFC4P35249 363 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 CCDC27Q2M243 656 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 MIER1Q8N108 512 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 SLC4A9Q96Q91 983 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 CHMP4AQ9BY43 222 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
CD9-211ENST00000546073 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
CD9-211ENST00000546073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
CD9-211ENST00000546073 CFAP44Q96MT7 982 aa22.74■■□□□ 1.23
CD9-211ENST00000546073 ZBTB7AO95365 584 aa22.73■■□□□ 1.23
CD9-211ENST00000546073 A0A087WZG4 1122 aa22.72■■□□□ 1.23
CD9-211ENST00000546073 KCNQ3O43525 872 aa22.72■■□□□ 1.23
CD9-211ENST00000546073 CYP19A1P11511 503 aaPredicted RBP22.72■■□□□ 1.23
CD9-211ENST00000546073 ARXQ96QS3 562 aa22.72■■□□□ 1.23
CD9-211ENST00000546073 IFT57Q9NWB7 429 aa22.72■■□□□ 1.23
CD9-211ENST00000546073 PNPLA7Q6ZV29 1317 aa22.72■■□□□ 1.23
CD9-211ENST00000546073 ZPR1O75312 459 aa22.71■■□□□ 1.23
CD9-211ENST00000546073 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
CD9-211ENST00000546073 EIF4A1P60842 406 aaKnown RBP22.71■■□□□ 1.23
CD9-211ENST00000546073 ZNF330Q9Y3S2 320 aaPredicted RBP22.71■■□□□ 1.23
CD9-211ENST00000546073 CHL1O00533 1208 aa22.7■■□□□ 1.22
CD9-211ENST00000546073 COL23A1Q86Y22 540 aaPredicted RBP22.7■■□□□ 1.22
CD9-211ENST00000546073 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms