RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 RAB11FIP3O75154 756 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 IL2RBP14784 551 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 SOGA3Q5TF21 947 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 TMEM57Q8N5G2 664 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 NUTM1Q86Y26 1132 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 CCDC73Q6ZRK6 1079 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
MTHFD1-202ENST00000545908 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.68
MTHFD1-202ENST00000545908 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.68
MTHFD1-202ENST00000545908 CHD1LQ86WJ1 897 aa10.77□□□□□ -0.68
MTHFD1-202ENST00000545908 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 C6orf229H3BNL8 230 aa10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 YTHDC2Q9H6S0 1430 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 STK3Q13188 491 aa10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
MTHFD1-202ENST00000545908 NKTRP30414 1462 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 NUCB2P80303 420 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 NBPF6Q5VWK0 638 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 NBPF4Q96M43 638 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 CDC5LQ99459 802 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 UBAC1Q9BSL1 405 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 KCNA6P17658 529 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 CYP46A1Q9Y6A2 500 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 FANCIQ9NVI1 1328 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 CWC27Q6UX04 472 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 TXLNAP40222 546 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 SETDB2Q96T68 719 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 CTNNA3Q9UI47 895 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 KRT18P05783 430 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 FBLN1P23142 703 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 OLFM4Q6UX06 510 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 KIF1BO60333 1816 aa10.76□□□□□ -0.69
MTHFD1-202ENST00000545908 ANKRD1Q15327 319 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 TRIM22Q8IYM9 498 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 PTPRCP08575 1304 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 WDHD1O75717 1129 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 POLD1P28340 1107 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 DEKP35659 375 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 KIF1BPQ96EK5 621 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 ATP2B1P20020 1258 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 F6X3S4 739 aa10.75□□□□□ -0.69
MTHFD1-202ENST00000545908 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 IMMTQ16891 758 aaKnown RBP10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 CCDC184Q52MB2 194 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 AKAP4Q5JQC9 854 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 PIK3R4Q99570 1358 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 ABCA8O94911 1581 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 HECW2Q9P2P5 1572 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 FAM83GA6ND36 823 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 ATP5J2-PTCD1G3V325 749 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 CCDC152Q4G0S7 254 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 ZNF396Q96N95 335 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 ZNF76P36508 570 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 HSP90AB2PQ58FF8 381 aa10.74□□□□□ -0.69
MTHFD1-202ENST00000545908 NEK4P51957 841 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 ARHGEF5Q12774 1597 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 MAP3K12Q12852 859 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 TBX22Q9Y458 520 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 SHROOM2Q13796 1616 aa10.73□□□□□ -0.69
MTHFD1-202ENST00000545908 MINDY4BA8MYZ0 360 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 MCM2P49736 904 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 KDM5DQ9BY66 1539 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 NYXQ9GZU5 481 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 SMARCA5O60264 1052 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 PREX2Q70Z35 1606 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 IPO7O95373 1038 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
MTHFD1-202ENST00000545908 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 CDKL5O76039 1030 aa10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 FLIIQ13045 1269 aa10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 FLT4P35916 1363 aa10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 KDM5AP29375 1690 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-202ENST00000545908 BOLA2Q9H3K6 86 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms