RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
CNN3-207ENST00000545882 IBTKQ9P2D0 1353 aaPredicted RBP18.79■□□□□ 0.6
CNN3-207ENST00000545882 GOLGA6L22H0YM25 854 aa18.78■□□□□ 0.6
CNN3-207ENST00000545882 ERC2O15083 957 aa18.78■□□□□ 0.6
CNN3-207ENST00000545882 ZGPATQ8N5A5 531 aaKnown RBP18.78■□□□□ 0.6
CNN3-207ENST00000545882 REC8O95072 547 aa18.78■□□□□ 0.6
CNN3-207ENST00000545882 DDX49Q9Y6V7 483 aaKnown RBP18.78■□□□□ 0.6
CNN3-207ENST00000545882 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
CNN3-207ENST00000545882 LMBRD1Q9NUN5 540 aa18.77■□□□□ 0.6
CNN3-207ENST00000545882 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
CNN3-207ENST00000545882 GNAI2P04899 355 aa18.76■□□□□ 0.59
CNN3-207ENST00000545882 MCTP1Q6DN14 999 aa18.76■□□□□ 0.59
CNN3-207ENST00000545882 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
CNN3-207ENST00000545882 ST18O60284 1047 aa18.76■□□□□ 0.59
CNN3-207ENST00000545882 CWC22Q9HCG8 908 aaKnown RBP18.76■□□□□ 0.59
CNN3-207ENST00000545882 ESPNB1AK53 854 aa18.75■□□□□ 0.59
CNN3-207ENST00000545882 ZNF142P52746 1687 aaPredicted RBP18.75■□□□□ 0.59
CNN3-207ENST00000545882 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
CNN3-207ENST00000545882 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
CNN3-207ENST00000545882 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
CNN3-207ENST00000545882 KCNA6P17658 529 aa18.74■□□□□ 0.59
CNN3-207ENST00000545882 AMPHP49418 695 aa18.74■□□□□ 0.59
CNN3-207ENST00000545882 FLIIQ13045 1269 aa18.74■□□□□ 0.59
CNN3-207ENST00000545882 ATP8B2P98198 1209 aa18.73■□□□□ 0.59
CNN3-207ENST00000545882 CHD2O14647 1828 aaKnown RBP18.73■□□□□ 0.59
CNN3-207ENST00000545882 ZNF445P59923 1031 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 NGDNQ8NEJ9 315 aaKnown RBP18.72■□□□□ 0.59
CNN3-207ENST00000545882 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 STK31Q9BXU1 1019 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
CNN3-207ENST00000545882 CCDC30Q5VVM6 783 aa18.71■□□□□ 0.59
CNN3-207ENST00000545882 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
CNN3-207ENST00000545882 GNAI3P08754 354 aa18.7■□□□□ 0.58
CNN3-207ENST00000545882 FKBP5Q13451 457 aaPredicted RBP18.7■□□□□ 0.58
CNN3-207ENST00000545882 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
CNN3-207ENST00000545882 NECTIN2Q92692 538 aa18.7■□□□□ 0.58
CNN3-207ENST00000545882 MX1P20591 662 aa18.7■□□□□ 0.58
CNN3-207ENST00000545882 NASPP49321 788 aaPredicted RBP18.7■□□□□ 0.58
CNN3-207ENST00000545882 HOXC9P31274 260 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 CAVIN1Q6NZI2 390 aaKnown RBP18.69■□□□□ 0.58
CNN3-207ENST00000545882 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 CHAMP1Q96JM3 812 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 STAP2Q9UGK3 403 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 PALD1Q9ULE6 856 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 PXDNLA1KZ92 1463 aa18.69■□□□□ 0.58
CNN3-207ENST00000545882 CHMLP26374 656 aa18.68■□□□□ 0.58
CNN3-207ENST00000545882 NEK4P51957 841 aa18.68■□□□□ 0.58
CNN3-207ENST00000545882 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
CNN3-207ENST00000545882 TMX3Q96JJ7 454 aa18.68■□□□□ 0.58
CNN3-207ENST00000545882 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
CNN3-207ENST00000545882 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
CNN3-207ENST00000545882 USP44Q9H0E7 712 aa18.68■□□□□ 0.58
CNN3-207ENST00000545882 LTN1O94822 1766 aa18.67■□□□□ 0.58
CNN3-207ENST00000545882 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
CNN3-207ENST00000545882 NLRP6P59044 892 aa18.67■□□□□ 0.58
CNN3-207ENST00000545882 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
CNN3-207ENST00000545882 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
CNN3-207ENST00000545882 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
CNN3-207ENST00000545882 CUL4AQ13619 759 aa18.66■□□□□ 0.58
CNN3-207ENST00000545882 IL17RAQ96F46 866 aa18.66■□□□□ 0.58
CNN3-207ENST00000545882 NAP1L5Q96NT1 182 aaPredicted RBP18.66■□□□□ 0.58
CNN3-207ENST00000545882 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
CNN3-207ENST00000545882 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
CNN3-207ENST00000545882 NUTM2GQ5VZR2 741 aa18.65■□□□□ 0.58
CNN3-207ENST00000545882 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
CNN3-207ENST00000545882 RILPL2Q969X0 211 aa18.64■□□□□ 0.58
CNN3-207ENST00000545882 RBSNQ9H1K0 784 aa18.64■□□□□ 0.58
CNN3-207ENST00000545882 ADAMTSL3P82987 1691 aa18.64■□□□□ 0.58
CNN3-207ENST00000545882 KDM3BQ7LBC6 1761 aa18.64■□□□□ 0.57
CNN3-207ENST00000545882 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
CNN3-207ENST00000545882 ANAPC15P60006 121 aa18.64■□□□□ 0.57
CNN3-207ENST00000545882 IL25Q9H293 177 aa18.64■□□□□ 0.57
CNN3-207ENST00000545882 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
CNN3-207ENST00000545882 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
CNN3-207ENST00000545882 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
CNN3-207ENST00000545882 SSH3Q8TE77 659 aa18.63■□□□□ 0.57
CNN3-207ENST00000545882 PHAXQ9H814 394 aaKnown RBP18.63■□□□□ 0.57
CNN3-207ENST00000545882 BRD1O95696 1058 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 MCM2P49736 904 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 TCHHQ07283 1943 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
CNN3-207ENST00000545882 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 PRKCSHP14314 528 aaPredicted RBP18.62■□□□□ 0.57
CNN3-207ENST00000545882 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
CNN3-207ENST00000545882 ANO2Q9NQ90 1003 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 AOX1Q06278 1338 aa18.62■□□□□ 0.57
CNN3-207ENST00000545882 FOXD4L5Q5VV16 416 aaPredicted RBP18.61■□□□□ 0.57
CNN3-207ENST00000545882 FOXD4L4Q8WXT5 416 aaPredicted RBP18.61■□□□□ 0.57
CNN3-207ENST00000545882 LTV1Q96GA3 475 aaPredicted RBP18.61■□□□□ 0.57
CNN3-207ENST00000545882 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
CNN3-207ENST00000545882 NFAT5O94916 1531 aa18.61■□□□□ 0.57
CNN3-207ENST00000545882 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
CNN3-207ENST00000545882 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
CNN3-207ENST00000545882 MCCP23508 829 aa18.61■□□□□ 0.57
CNN3-207ENST00000545882 POLA2Q14181 598 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms