RNA–Protein interactions for RNA: ENST00000545544.1

RHOF-206, Transcript of ras homolog family member F, filopodia associated, humanhuman

TSL 5

Gene RHOF, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOF-206ENST00000545544 LGR6Q9HBX8 967 aa22.18■■□□□ 1.14
RHOF-206ENST00000545544 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
RHOF-206ENST00000545544 RNMTO43148 476 aaKnown RBP22.17■■□□□ 1.14
RHOF-206ENST00000545544 MRC1P22897 1456 aa22.15■■□□□ 1.14
RHOF-206ENST00000545544 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
RHOF-206ENST00000545544 SIK1P57059 783 aa22.15■■□□□ 1.14
RHOF-206ENST00000545544 PDGFDQ9GZP0 370 aaPredicted RBP22.15■■□□□ 1.14
RHOF-206ENST00000545544 DLG5Q8TDM6 1919 aa22.15■■□□□ 1.14
RHOF-206ENST00000545544 MAP3K5Q99683 1374 aa22.14■■□□□ 1.14
RHOF-206ENST00000545544 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
RHOF-206ENST00000545544 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
RHOF-206ENST00000545544 SIPA1L3O60292 1781 aaPredicted RBP22.14■■□□□ 1.13
RHOF-206ENST00000545544 C4BP0C0L5 1744 aa22.14■■□□□ 1.13
RHOF-206ENST00000545544 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
RHOF-206ENST00000545544 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
RHOF-206ENST00000545544 TFCP2L1Q9NZI6 479 aa22.11■■□□□ 1.13
RHOF-206ENST00000545544 COL5A3P25940 1745 aaPredicted RBP22.1■■□□□ 1.13
RHOF-206ENST00000545544 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
RHOF-206ENST00000545544 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
RHOF-206ENST00000545544 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
RHOF-206ENST00000545544 ITPK1Q13572 414 aa22.09■■□□□ 1.13
RHOF-206ENST00000545544 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
RHOF-206ENST00000545544 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
RHOF-206ENST00000545544 PNPLA7Q6ZV29 1317 aa22.08■■□□□ 1.13
RHOF-206ENST00000545544 RBM42Q9BTD8 480 aaKnown RBP22.08■■□□□ 1.13
RHOF-206ENST00000545544 CEMIPQ8WUJ3 1361 aa22.08■■□□□ 1.12
RHOF-206ENST00000545544 UBR2Q8IWV8 1755 aa22.07■■□□□ 1.12
RHOF-206ENST00000545544 CICQ96RK0 1608 aaPredicted RBP22.07■■□□□ 1.12
RHOF-206ENST00000545544 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
RHOF-206ENST00000545544 NEFMP07197 916 aa22.07■■□□□ 1.12
RHOF-206ENST00000545544 LINC00116Q8NCU8 138 aa22.07■■□□□ 1.12
RHOF-206ENST00000545544 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
RHOF-206ENST00000545544 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
RHOF-206ENST00000545544 TJP1Q07157 1748 aa22.06■■□□□ 1.12
RHOF-206ENST00000545544 HTATSF1O43719 755 aaKnown RBP22.05■■□□□ 1.12
RHOF-206ENST00000545544 PTCD1O75127 700 aaKnown RBP22.05■■□□□ 1.12
RHOF-206ENST00000545544 TEFQ10587 303 aa22.05■■□□□ 1.12
RHOF-206ENST00000545544 SLC16A10Q8TF71 515 aa22.05■■□□□ 1.12
RHOF-206ENST00000545544 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
RHOF-206ENST00000545544 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
RHOF-206ENST00000545544 SLC39A6Q13433 755 aa22.04■■□□□ 1.12
RHOF-206ENST00000545544 COL23A1Q86Y22 540 aaPredicted RBP22.03■■□□□ 1.12
RHOF-206ENST00000545544 FLAD1Q8NFF5 587 aa22.03■■□□□ 1.12
RHOF-206ENST00000545544 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
RHOF-206ENST00000545544 AK7Q96M32 723 aa22.03■■□□□ 1.12
RHOF-206ENST00000545544 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
RHOF-206ENST00000545544 KCPQ6ZWJ8 1503 aa22.02■■□□□ 1.12
RHOF-206ENST00000545544 MAPK8IP3Q9UPT6 1336 aa22.02■■□□□ 1.12
RHOF-206ENST00000545544 PTGER2P43116 358 aa22.01■■□□□ 1.11
RHOF-206ENST00000545544 NFE2L2Q16236 605 aa22.01■■□□□ 1.11
RHOF-206ENST00000545544 RC3H1Q5TC82 1133 aaKnown RBP22.01■■□□□ 1.11
RHOF-206ENST00000545544 WDR43Q15061 677 aaKnown RBP eCLIP22■■□□□ 1.112e-6■□□□□ 8.5
RHOF-206ENST00000545544 MCM10Q7L590 875 aa22■■□□□ 1.11
RHOF-206ENST00000545544 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
RHOF-206ENST00000545544 DCTN1Q14203 1278 aa21.99■■□□□ 1.11
RHOF-206ENST00000545544 SGIP1Q9BQI5 828 aa21.99■■□□□ 1.11
RHOF-206ENST00000545544 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
RHOF-206ENST00000545544 GNPATO15228 680 aa21.98■■□□□ 1.11
RHOF-206ENST00000545544 ANP32CO43423 234 aa21.98■■□□□ 1.11
RHOF-206ENST00000545544 SSFA2P28290 1259 aa21.98■■□□□ 1.11
RHOF-206ENST00000545544 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
RHOF-206ENST00000545544 ADAMTS8Q9UP79 889 aa21.98■■□□□ 1.11
RHOF-206ENST00000545544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.97■■□□□ 1.11
RHOF-206ENST00000545544 MSH5O43196 834 aa21.97■■□□□ 1.11
RHOF-206ENST00000545544 TTC5Q8N0Z6 440 aa21.97■■□□□ 1.11
RHOF-206ENST00000545544 VSIG10Q8N0Z9 540 aa21.97■■□□□ 1.11
RHOF-206ENST00000545544 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
RHOF-206ENST00000545544 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
RHOF-206ENST00000545544 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
RHOF-206ENST00000545544 PPP1R1BQ9UD71 204 aaPredicted RBP21.96■■□□□ 1.11
RHOF-206ENST00000545544 RPS6KA4O75676 772 aa21.94■■□□□ 1.1
RHOF-206ENST00000545544 PHF14O94880 888 aa21.94■■□□□ 1.1
RHOF-206ENST00000545544 TMPOP42166 694 aaKnown RBP21.94■■□□□ 1.1
RHOF-206ENST00000545544 CRKLP46109 303 aaKnown RBP21.94■■□□□ 1.1
RHOF-206ENST00000545544 TAF7Q15545 349 aaPredicted RBP21.94■■□□□ 1.1
RHOF-206ENST00000545544 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
RHOF-206ENST00000545544 CCDC146Q8IYE0 955 aa21.94■■□□□ 1.1
RHOF-206ENST00000545544 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
RHOF-206ENST00000545544 ZNF496Q96IT1 587 aaPredicted RBP21.94■■□□□ 1.1
RHOF-206ENST00000545544 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
RHOF-206ENST00000545544 RIPK4P57078 832 aa21.93■■□□□ 1.1
RHOF-206ENST00000545544 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
RHOF-206ENST00000545544 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
RHOF-206ENST00000545544 HEG1Q9ULI3 1381 aa21.92■■□□□ 1.1
RHOF-206ENST00000545544 KCNQ3O43525 872 aa21.92■■□□□ 1.1
RHOF-206ENST00000545544 CYP19A1P11511 503 aaPredicted RBP21.92■■□□□ 1.1
RHOF-206ENST00000545544 TRAPPC3LQ5T215 181 aa21.92■■□□□ 1.1
RHOF-206ENST00000545544 INTS5Q6P9B9 1019 aaKnown RBP21.92■■□□□ 1.1
RHOF-206ENST00000545544 ADRA2BP18089 450 aa21.91■■□□□ 1.1
RHOF-206ENST00000545544 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
RHOF-206ENST00000545544 POLD1P28340 1107 aa21.9■■□□□ 1.1
RHOF-206ENST00000545544 ARXQ96QS3 562 aa21.9■■□□□ 1.1
RHOF-206ENST00000545544 TEX13AQ9BXU3 409 aaPredicted RBP21.9■■□□□ 1.1
RHOF-206ENST00000545544 CCDC87Q9NVE4 849 aa21.9■■□□□ 1.1
RHOF-206ENST00000545544 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.09
RHOF-206ENST00000545544 THUMPD2Q9BTF0 503 aaKnown RBP21.89■■□□□ 1.09
RHOF-206ENST00000545544 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
RHOF-206ENST00000545544 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
RHOF-206ENST00000545544 STARD3NLO95772 234 aa21.87■■□□□ 1.09
RHOF-206ENST00000545544 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms