RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
LDHA-224ENST00000545467 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
LDHA-224ENST00000545467 NFAT5O94916 1531 aa10.57□□□□□ -0.72
LDHA-224ENST00000545467 TTC21AQ8NDW8 1320 aa10.57□□□□□ -0.72
LDHA-224ENST00000545467 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
LDHA-224ENST00000545467 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
LDHA-224ENST00000545467 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
LDHA-224ENST00000545467 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
LDHA-224ENST00000545467 MLLT1Q03111 559 aaPredicted RBP10.55□□□□□ -0.72
LDHA-224ENST00000545467 FOXN1O15353 648 aa10.54□□□□□ -0.72
LDHA-224ENST00000545467 RGS19P49795 217 aa10.54□□□□□ -0.72
LDHA-224ENST00000545467 AK7Q96M32 723 aa10.54□□□□□ -0.72
LDHA-224ENST00000545467 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
LDHA-224ENST00000545467 RNF123Q5XPI4 1314 aa10.54□□□□□ -0.72
LDHA-224ENST00000545467 NSD3Q9BZ95 1437 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
LDHA-224ENST00000545467 A0A0G2JLW4 131 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 FCHSD2O94868 740 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
LDHA-224ENST00000545467 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 PANK3Q9H999 370 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
LDHA-224ENST00000545467 SSFA2P28290 1259 aa10.52□□□□□ -0.73
LDHA-224ENST00000545467 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
LDHA-224ENST00000545467 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.73
LDHA-224ENST00000545467 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
LDHA-224ENST00000545467 C5P01031 1676 aa10.52□□□□□ -0.73
LDHA-224ENST00000545467 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
LDHA-224ENST00000545467 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
LDHA-224ENST00000545467 PDE4DIPQ5VU43 2346 aa10.51□□□□□ -0.73
LDHA-224ENST00000545467 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
LDHA-224ENST00000545467 PHF14O94880 888 aa10.51□□□□□ -0.73
LDHA-224ENST00000545467 MMP10P09238 476 aa10.51□□□□□ -0.73
LDHA-224ENST00000545467 VEGFAP15692 232 aaPredicted RBP10.51□□□□□ -0.73
LDHA-224ENST00000545467 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
LDHA-224ENST00000545467 RNF181Q9P0P0 153 aa10.51□□□□□ -0.73
LDHA-224ENST00000545467 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
LDHA-224ENST00000545467 TAF1LQ8IZX4 1826 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 DPEP1P16444 411 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 AIDAQ96BJ3 306 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 CREBZFQ9NS37 354 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
LDHA-224ENST00000545467 USP31Q70CQ4 1352 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 PALLDQ8WX93 1383 aa10.5□□□□□ -0.73
LDHA-224ENST00000545467 SMARCC1Q92922 1105 aaPredicted RBP10.49□□□□□ -0.73
LDHA-224ENST00000545467 PUS7Q96PZ0 661 aaKnown RBP10.49□□□□□ -0.73
LDHA-224ENST00000545467 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
LDHA-224ENST00000545467 KIF20BQ96Q89 1820 aa10.49□□□□□ -0.73
LDHA-224ENST00000545467 C4BP0C0L5 1744 aa10.48□□□□□ -0.73
LDHA-224ENST00000545467 PKD1L3Q7Z443 1732 aa10.48□□□□□ -0.73
LDHA-224ENST00000545467 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
LDHA-224ENST00000545467 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
LDHA-224ENST00000545467 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
LDHA-224ENST00000545467 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
LDHA-224ENST00000545467 UBR3Q6ZT12 1888 aa10.48□□□□□ -0.73
LDHA-224ENST00000545467 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 GLTPD2A6NH11 291 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 KCNA3P22001 575 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 CNGB1Q14028 1251 aaPredicted RBP10.47□□□□□ -0.73
LDHA-224ENST00000545467 CC2D1BQ5T0F9 858 aaKnown RBP10.47□□□□□ -0.73
LDHA-224ENST00000545467 NLGN1Q8N2Q7 840 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 IP6K1Q92551 441 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 CCDC87Q9NVE4 849 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 EVC2Q86UK5 1308 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
LDHA-224ENST00000545467 LBX1P52954 281 aa10.46□□□□□ -0.73
LDHA-224ENST00000545467 DALRD3Q5D0E6 543 aaKnown RBP10.46□□□□□ -0.73
LDHA-224ENST00000545467 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
LDHA-224ENST00000545467 TOGARAM1Q9Y4F4 1720 aa10.46□□□□□ -0.74
LDHA-224ENST00000545467 SBF1O95248 1867 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 BRCA1P38398 1863 aaKnown RBP10.45□□□□□ -0.74
LDHA-224ENST00000545467 CNTNAP1P78357 1384 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 PPP2R1AP30153 589 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 WDR43Q15061 677 aaKnown RBP eCLIP10.45□□□□□ -0.74
LDHA-224ENST00000545467 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 NGEFQ8N5V2 710 aa10.45□□□□□ -0.74
LDHA-224ENST00000545467 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
LDHA-224ENST00000545467 LTN1O94822 1766 aa10.44□□□□□ -0.74
LDHA-224ENST00000545467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDHA-224ENST00000545467 GNPATO15228 680 aa10.43□□□□□ -0.74
LDHA-224ENST00000545467 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
LDHA-224ENST00000545467 NME9Q86XW9 330 aa10.43□□□□□ -0.74
LDHA-224ENST00000545467 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
LDHA-224ENST00000545467 FAM208AQ9UK61 1670 aaKnown RBP10.43□□□□□ -0.74
LDHA-224ENST00000545467 LOC102724428A0A0B4J2F2 783 aa10.42□□□□□ -0.74
LDHA-224ENST00000545467 POTECB2RU33 542 aa10.42□□□□□ -0.74
LDHA-224ENST00000545467 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
LDHA-224ENST00000545467 SIK1P57059 783 aa10.42□□□□□ -0.74
LDHA-224ENST00000545467 PARP3Q9Y6F1 533 aa10.42□□□□□ -0.74
LDHA-224ENST00000545467 MEGF6O75095 1541 aa10.42□□□□□ -0.74
LDHA-224ENST00000545467 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
LDHA-224ENST00000545467 LMNB1P20700 586 aa10.41□□□□□ -0.74
LDHA-224ENST00000545467 VEGFBP49765 207 aa10.41□□□□□ -0.74
LDHA-224ENST00000545467 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
LDHA-224ENST00000545467 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms