RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 RIPK4P57078 832 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 PSME1Q06323 249 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 DSG2Q14126 1118 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 NEUROD2Q15784 382 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 GPR153Q6NV75 609 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 PLPP6Q8IY26 295 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 KCNH5Q8NCM2 988 aa7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 RBM33Q96EV2 1170 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-214ENST00000545358 FANCIQ9NVI1 1328 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 PXDNQ92626 1479 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 TBC1D12O60347 775 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 HMOX1P09601 288 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 HOXC9P31274 260 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 PAXIP1Q6ZW49 1069 aaPredicted RBP7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 PTCD2Q8WV60 388 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 MARVELD3Q96A59 401 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 DDX27Q96GQ7 796 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 NCAPD2Q15021 1401 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 TNS3Q68CZ2 1445 aa7.07□□□□□ -1.28
NPIPB3-214ENST00000545358 FAM208AQ9UK61 1670 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 NPHP3Q7Z494 1330 aa7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 MFSD10Q14728 455 aa7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 HSP90AB2PQ58FF8 381 aa7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 PPP1R15BQ5SWA1 713 aa7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 ORAI2Q96SN7 254 aa7.06□□□□□ -1.28
NPIPB3-214ENST00000545358 SULT6B1Q6IMI4 303 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 KRT28Q7Z3Y7 464 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 IP6K1Q92551 441 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 PHACTR3Q96KR7 559 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 CFAP44Q96MT7 982 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 LARP6Q9BRS8 491 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 IFT57Q9NWB7 429 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 PCDHGA4Q9Y5G9 962 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 LMO7Q8WWI1 1683 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 PLEKHG2Q9H7P9 1386 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 NHSL1Q5SYE7 1610 aa7.05□□□□□ -1.28
NPIPB3-214ENST00000545358 ERBB3P21860 1342 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 FOXO3O43524 673 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 RARSP54136 660 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 GNAI1P63096 354 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 ARSIQ5FYB1 569 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 B4GALNT3Q6L9W6 998 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 AEBP1Q8IUX7 1158 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 GAS2L2Q8NHY3 880 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 CCDC136Q96JN2 1154 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 ABCA3Q99758 1704 aa7.04□□□□□ -1.28
NPIPB3-214ENST00000545358 KIF16BQ96L93 1317 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 ZNF335Q9H4Z2 1342 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 PSDA5PKW4 1024 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 FAM205CA6NFA0 338 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 PLIN1O60240 522 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 ZNF853P0CG23 659 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 AAMPQ13685 434 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 ARHGEF25Q86VW2 580 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 CDAN1Q8IWY9 1227 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 TSR2Q969E8 191 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 HS3ST6Q96QI5 342 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 CRBNQ96SW2 442 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 EYA1Q99502 592 aa7.03□□□□□ -1.28
NPIPB3-214ENST00000545358 HTATSF1O43719 755 aaKnown RBP7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 BCAR3O75815 825 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 GCP02774 474 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 MS4A1P11836 297 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 ALDH1L2Q3SY69 923 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 MAP3K5Q99683 1374 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 COL18A1P39060 1754 aa7.02□□□□□ -1.29
NPIPB3-214ENST00000545358 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 OVOS2A0A0G2JMS6 1433 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 CRB1P82279 1406 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 RGPD2P0DJD1 1756 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 CPDO75976 1380 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 KIAA0232Q92628 1395 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 HAP1P54257 671 aaPredicted RBP7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 XPCQ01831 940 aaPredicted RBP7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 EXOSC9Q06265 439 aaKnown RBP7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 C20orf194Q5TEA3 1177 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
NPIPB3-214ENST00000545358 ZKSCAN2Q63HK3 967 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 LMOD2Q6P5Q4 547 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 OXER1Q8TDS5 423 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
NPIPB3-214ENST00000545358 MBIPQ9NS73 344 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 SMC4Q9NTJ3 1288 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 AHDC1Q5TGY3 1603 aaPredicted RBP7□□□□□ -1.29
NPIPB3-214ENST00000545358 RGPD5Q99666 1765 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
NPIPB3-214ENST00000545358 ADAMTS7Q9UKP4 1686 aa7□□□□□ -1.29
NPIPB3-214ENST00000545358 LTBP4Q8N2S1 1624 aa6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 FAM83GA6ND36 823 aa6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 CHL1O00533 1208 aa6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 NUDT7P0C024 238 aa6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 MTHFSDQ2M296 383 aaKnown RBP6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 VARS2Q5ST30 1063 aaKnown RBP6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 ANKRD24Q8TF21 1146 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms