RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 MST1RQ04912 1400 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 FOXO3O43524 673 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 TRAK2O60296 914 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 SDSP20132 328 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 IL17RAQ96F46 866 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
PAAF1-215ENST00000544909 SALL3Q9BXA9 1300 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 LMO7Q8WWI1 1683 aa15.35■□□□□ 0.05
PAAF1-215ENST00000544909 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
PAAF1-215ENST00000544909 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
PAAF1-215ENST00000544909 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
PAAF1-215ENST00000544909 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
PAAF1-215ENST00000544909 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.05
PAAF1-215ENST00000544909 ST18O60284 1047 aa15.33■□□□□ 0.05
PAAF1-215ENST00000544909 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.05
PAAF1-215ENST00000544909 SLIT3O75094 1523 aa15.33■□□□□ 0.05
PAAF1-215ENST00000544909 GOLGA6L22H0YM25 854 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 ERC2O15083 957 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 MCM2P49736 904 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 PDE1AP54750 535 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 NUCB2P80303 420 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 ATP8B2P98198 1209 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 CAMTA1Q9Y6Y1 1673 aa15.33■□□□□ 0.04
PAAF1-215ENST00000544909 ANAPC15P60006 121 aa15.32■□□□□ 0.04
PAAF1-215ENST00000544909 FKBP5Q13451 457 aaPredicted RBP15.32■□□□□ 0.04
PAAF1-215ENST00000544909 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
PAAF1-215ENST00000544909 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
PAAF1-215ENST00000544909 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
PAAF1-215ENST00000544909 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
PAAF1-215ENST00000544909 MRE11P49959 708 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 G2E3Q7L622 706 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 SOX12O15370 315 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 AMOTQ4VCS5 1084 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
PAAF1-215ENST00000544909 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
PAAF1-215ENST00000544909 ABCC6O95255 1503 aa15.3■□□□□ 0.04
PAAF1-215ENST00000544909 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
PAAF1-215ENST00000544909 SSH3Q8TE77 659 aa15.29■□□□□ 0.04
PAAF1-215ENST00000544909 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
PAAF1-215ENST00000544909 MIS18AQ9NYP9 233 aa15.29■□□□□ 0.04
PAAF1-215ENST00000544909 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 F6X3S4 739 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
PAAF1-215ENST00000544909 MX1P20591 662 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 HSP90AB4PQ58FF6 505 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
PAAF1-215ENST00000544909 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.04
PAAF1-215ENST00000544909 UBTFL1P0CB47 393 aaPredicted RBP15.27■□□□□ 0.04
PAAF1-215ENST00000544909 MCCP23508 829 aa15.27■□□□□ 0.04
PAAF1-215ENST00000544909 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.04
PAAF1-215ENST00000544909 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.03
PAAF1-215ENST00000544909 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.03
PAAF1-215ENST00000544909 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
PAAF1-215ENST00000544909 POLA2Q14181 598 aa15.26■□□□□ 0.03
PAAF1-215ENST00000544909 PLEKHO1Q53GL0 409 aaPredicted RBP15.26■□□□□ 0.03
PAAF1-215ENST00000544909 USP44Q9H0E7 712 aa15.26■□□□□ 0.03
PAAF1-215ENST00000544909 NPHP4O75161 1426 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-215ENST00000544909 MTX1Q13505 466 aa15.24■□□□□ 0.03
PAAF1-215ENST00000544909 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
PAAF1-215ENST00000544909 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
PAAF1-215ENST00000544909 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
PAAF1-215ENST00000544909 ESYT1Q9BSJ8 1104 aa15.24■□□□□ 0.03
PAAF1-215ENST00000544909 USP42Q9H9J4 1324 aaKnown RBP15.23■□□□□ 0.03
PAAF1-215ENST00000544909 PSME1Q06323 249 aa15.23■□□□□ 0.03
PAAF1-215ENST00000544909 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
PAAF1-215ENST00000544909 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
PAAF1-215ENST00000544909 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
PAAF1-215ENST00000544909 TRPM3Q9HCF6 1732 aaPredicted RBP15.23■□□□□ 0.03
PAAF1-215ENST00000544909 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
PAAF1-215ENST00000544909 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.03
PAAF1-215ENST00000544909 KIF1BPQ96EK5 621 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 LRRFIP2Q9Y608 721 aaKnown RBP15.22■□□□□ 0.03
PAAF1-215ENST00000544909 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 TEFQ10587 303 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
PAAF1-215ENST00000544909 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
PAAF1-215ENST00000544909 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
PAAF1-215ENST00000544909 CHMLP26374 656 aa15.21■□□□□ 0.03
PAAF1-215ENST00000544909 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.02
PAAF1-215ENST00000544909 DCCP43146 1447 aa15.2■□□□□ 0.02
PAAF1-215ENST00000544909 BEND3Q5T5X7 828 aa15.2■□□□□ 0.02
PAAF1-215ENST00000544909 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
PAAF1-215ENST00000544909 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
PAAF1-215ENST00000544909 CUL4AQ13619 759 aa15.2■□□□□ 0.02
PAAF1-215ENST00000544909 GCP02774 474 aa15.19■□□□□ 0.02
PAAF1-215ENST00000544909 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
PAAF1-215ENST00000544909 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
PAAF1-215ENST00000544909 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
PAAF1-215ENST00000544909 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
PAAF1-215ENST00000544909 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
PAAF1-215ENST00000544909 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
PAAF1-215ENST00000544909 KLHL34Q8N239 644 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms