RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CBLB	Q13191	982 aa		8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	CYP2U1	Q7Z449	544 aa		8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	SIX5	Q8N196	739 aa		8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	ZNF594	Q96JF6	807 aa	Predicted RBP	8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	DNMT3L	Q9UJW3	386 aa		8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	ZMIZ1	Q9ULJ6	1067 aa		8.08	□□□□□ -1.12
RAP1B-231	ENST00000544639	DKK1	O94907	266 aa		8.07	□□□□□ -1.12
RAP1B-231	ENST00000544639	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	8.07	□□□□□ -1.12
RAP1B-231	ENST00000544639	HOMEZ	Q8IX15	550 aa		8.07	□□□□□ -1.12
RAP1B-231	ENST00000544639	RETREG2	Q8NC44	543 aa		8.07	□□□□□ -1.12
RAP1B-231	ENST00000544639	NOVA2	Q9UNW9	492 aa	Known RBP	8.07	□□□□□ -1.12
RAP1B-231	ENST00000544639	TTLL8	A6PVC2	850 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	SPINT1	O43278	529 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	PSME1	Q06323	249 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	CCDC102B	Q68D86	513 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	ANKMY2	Q8IV38	441 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	KDF1	Q8NAX2	398 aa	Predicted RBP	8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	TPCN2	Q8NHX9	752 aa		8.06	□□□□□ -1.12
RAP1B-231	ENST00000544639	GNRH1	P01148	92 aa		8.05	□□□□□ -1.12
RAP1B-231	ENST00000544639	DPYD	Q12882	1025 aa		8.05	□□□□□ -1.12
RAP1B-231	ENST00000544639	STK32A	Q8WU08	396 aa		8.05	□□□□□ -1.12
RAP1B-231	ENST00000544639	TMEM229A	B2RXF0	380 aa		8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	WASL	O00401	505 aa	Predicted RBP	8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	STAU1	O95793	577 aa	Known RBP	8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	SCNN1D	P51172	638 aa		8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	GDF10	P55107	478 aa		8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	AGBL1	Q96MI9	1066 aa		8.04	□□□□□ -1.12
RAP1B-231	ENST00000544639	CSB-PGBD3	P0DP91	1061 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	PTGIR	P43119	386 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	TMEM164	Q5U3C3	297 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	FAM200A	Q8TCP9	573 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	ETNK1	Q9HBU6	452 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	ARHGEF10L	Q9HCE6	1279 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	UST	Q9Y2C2	406 aa		8.03	□□□□□ -1.12
RAP1B-231	ENST00000544639	TMEM88B	A6NKF7	163 aa		8.02	□□□□□ -1.13
RAP1B-231	ENST00000544639	RELB	Q01201	579 aa		8.02	□□□□□ -1.13
RAP1B-231	ENST00000544639	RAB6B	Q9NRW1	208 aa		8.02	□□□□□ -1.13
RAP1B-231	ENST00000544639	ZNF358	Q9NW07	568 aa		8.02	□□□□□ -1.13
RAP1B-231	ENST00000544639	RBM19	Q9Y4C8	960 aa	Known RBP	8.02	□□□□□ -1.13
RAP1B-231	ENST00000544639	SFI1	A8K8P3	1242 aa		8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639	INHA	P05111	366 aa		8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639	SEC13	P55735	322 aa		8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639	PTS	Q03393	145 aa		8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639	NANOS1	Q8WY41	292 aa	Known RBP	8.01	□□□□□ -1.13
RAP1B-231	ENST00000544639		A0A1W2PRU2	124 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639		M0R2N6	131 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	IL2RA	P01589	272 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	FAM69C	Q0P6D2	419 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	CLN3	Q13286	438 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	ESCO1	Q5FWF5	840 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	XAGE2	Q96GT9	111 aa		8	□□□□□ -1.13
RAP1B-231	ENST00000544639	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.99	□□□□□ -1.13
RAP1B-231	ENST00000544639	HRH3	Q9Y5N1	445 aa		7.99	□□□□□ -1.13
RAP1B-231	ENST00000544639	SLC35F4	A4IF30	521 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	CARNS1	A5YM72	827 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	FIGNL2	A6NMB9	653 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	PDE4C	Q08493	712 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	SWI5	Q1ZZU3	235 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	TSEN2	Q8NCE0	465 aa	Known RBP	7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	CNKSR1	Q969H4	720 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	SLC4A9	Q96Q91	983 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	ESYT1	Q9BSJ8	1104 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	SERTAD1	Q9UHV2	236 aa		7.98	□□□□□ -1.13
RAP1B-231	ENST00000544639	MEN1	O00255	615 aa		7.97	□□□□□ -1.13
RAP1B-231	ENST00000544639	BACH1	O14867	736 aa		7.97	□□□□□ -1.13
RAP1B-231	ENST00000544639	EPHA4	P54764	986 aa		7.97	□□□□□ -1.13
RAP1B-231	ENST00000544639	CCDC155	Q8N6L0	562 aa		7.97	□□□□□ -1.13
RAP1B-231	ENST00000544639	CTSO	P43234	321 aa	Predicted RBP	7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639	SMTN	P53814	917 aa		7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639	GPR161	Q8N6U8	529 aa	Known RBP	7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639	CLP1	Q92989	425 aa	Known RBP	7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639	TRAIP	Q9BWF2	469 aa		7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639	SLAIN2	Q9P270	581 aa		7.96	□□□□□ -1.14
RAP1B-231	ENST00000544639		A6NJY4	79 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	KRT76	Q01546	638 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	MTFR1	Q15390	333 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	TLR1	Q15399	786 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	TNS4	Q8IZW8	715 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	NLRP3	Q96P20	1036 aa		7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	INSM2	Q96T92	566 aa	Predicted RBP	7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.95	□□□□□ -1.14
RAP1B-231	ENST00000544639	PDIA4	P13667	645 aa	Known RBP	7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	ITGA6	P23229	1130 aa		7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	GPC1	P35052	558 aa		7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	CENPC	Q03188	943 aa		7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	RNF217	Q8TC41	542 aa		7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	HINFP	Q9BQA5	517 aa		7.94	□□□□□ -1.14
RAP1B-231	ENST00000544639	LGR5	O75473	907 aa		7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	RNF144A	P50876	292 aa	Predicted RBP	7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	FOXK2	Q01167	660 aa		7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	KCNMA1	Q12791	1236 aa		7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	POLM	Q9NP87	494 aa	Predicted RBP	7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.93	□□□□□ -1.14
RAP1B-231	ENST00000544639	WEE1	P30291	646 aa		7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	OCLN	Q16625	522 aa		7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	CNTNAP3B	Q96NU0	1288 aa		7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	CNTNAP3	Q9BZ76	1288 aa		7.92	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms